RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 MAGEH1Q9H213 219 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 COMMD8Q9NX08 183 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 UBA6A0AVT1 1052 aaPredicted RBP19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 NPHS1O60500 1241 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 DNAJB1P25685 340 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 CDH4P55283 916 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 BRSK1Q8TDC3 778 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 ACTRT2Q8TDY3 377 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 SLC26A7Q8TE54 656 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 PTERQ96BW5 349 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 VTI1BQ9UEU0 232 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 RPP40O75818 363 aaKnown RBP19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 PMLP29590 882 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 MSX2P35548 267 aaPredicted RBP19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 ABL2P42684 1182 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 SULT2A1Q06520 285 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 ACAP2Q15057 778 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 PIWIL4Q7Z3Z4 852 aaKnown RBP19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 SNX31Q8N9S9 440 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 OR4L1Q8NH43 312 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 IGSF21Q96ID5 467 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 ZBED2Q9BTP6 218 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 MUC3BQ9H195 1237 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 SEPT3Q9UH03 358 aa19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 AGO1Q9UL18 857 aaKnown RBP19.28■□□□□ 0.68
PCDHA4-201ENST00000378125 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 FKTNO75072 461 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 PPARGP37231 505 aaPredicted RBP19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 ZNF177Q13360 481 aaPredicted RBP19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 RNF219Q5W0B1 726 aaPredicted RBP19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 ISCA2Q86U28 154 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 BBS5Q8N3I7 341 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 LPCAT1Q8NF37 534 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 MDGA1Q8NFP4 955 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 RCN3Q96D15 328 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 CNDP1Q96KN2 507 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 TRIB3Q96RU7 358 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 MGME1Q9BQP7 344 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 CWH43Q9H720 699 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 CATSPERZQ9NTU4 200 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 TRPM5Q9NZQ8 1165 aa19.27■□□□□ 0.68
PCDHA4-201ENST00000378125 CFLARO15519 480 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 SNAP91O60641 907 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 SUPT7LO94864 414 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 NDST3O95803 873 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 RBP1P09455 135 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CDKN1CP49918 316 aaPredicted RBP19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 TIAL1Q01085 375 aaKnown RBP eCLIP19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CLEC6AQ6EIG7 209 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CUZD1Q86UP6 607 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 KBTBD2Q8IY47 623 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 OR4K2Q8NGD2 314 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CDKN2AIPNLQ96HQ2 116 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 RTKNQ9BST9 563 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 TRPC7Q9HCX4 862 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 BPIFA1Q9NP55 256 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 SCUBE2Q9NQ36 999 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 FAM50BQ9Y247 325 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 COPG1Q9Y678 874 aaKnown RBP19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 RGSL1A5PLK6 1076 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 SLCO1B7G3V0H7 640 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 SDHDO14521 159 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 INSIG1O15503 277 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 KDELR3O43731 214 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 THRAP10827 490 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 ATP6V1C1P21283 382 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CDH13P55290 713 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 DNAJB13P59910 316 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 AP2B1P63010 937 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 BTKQ06187 659 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CYLC2Q14093 348 aaPredicted RBP19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CCNIQ14094 377 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CYTH1Q15438 398 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 PPP1R3AQ16821 1122 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 C5orf22Q49AR2 442 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 FBXO48Q5FWF7 155 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 FAM45BPQ6NSW5 357 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 MRNIPQ6NTE8 343 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 PGM2L1Q6PCE3 622 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 GLT6D1Q7Z4J2 308 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 RNF148Q8N7C7 305 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 FAM45AQ8TCE6 357 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 PSKH2Q96QS6 385 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CDK5RAP1Q96SZ6 601 aaKnown RBP19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 POMPQ9Y244 141 aa19.26■□□□□ 0.67
PCDHA4-201ENST00000378125 LRRC14BA6NHZ5 514 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 UBFD1O14562 309 aaKnown RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 GNRH1P01148 92 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 SPATA31D3P0C874 917 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 FMO4P31512 558 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 SLC14A2Q15849 920 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 SPATA31D4Q6ZUB0 917 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 FBXW8Q8N3Y1 598 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 EFHBQ8N7U6 833 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ZNF599Q96NL3 588 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ANGPTL2Q9UKU9 493 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 CCNT2O60583 730 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms