RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SNRPB2P08579 225 aaKnown RBP10.96□□□□□ -0.65
BEST1-201ENST00000378043 ALDOCP09972 364 aaKnown RBP10.96□□□□□ -0.65
BEST1-201ENST00000378043 RHOQP17081 205 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 TYMPP19971 482 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 RHDQ02161 417 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 UNC50Q53HI1 259 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 C6orf10Q5SRN2 563 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 ARMC3Q5W041 872 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 MSANTD2Q6P1R3 559 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 MON1AQ86VX9 555 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 LPGAT1Q92604 370 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 L3HYPDHQ96EM0 354 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 TSPAN17Q96FV3 270 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 SLC2A11Q9BYW1 496 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 MFSD1Q9H3U5 465 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 TMEM248Q9NWD8 314 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 GMPR2Q9P2T1 348 aaKnown RBP10.96□□□□□ -0.65
BEST1-201ENST00000378043 APPL1Q9UKG1 709 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 SCML2Q9UQR0 700 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 SLC4A7Q9Y6M7 1214 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 ANKRD12Q6UB98 2062 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 VWA8A3KMH1 1905 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 GREB1Q4ZG55 1949 aa10.96□□□□□ -0.65
BEST1-201ENST00000378043 IGLV3-10A0A075B6K4 115 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 SMIM31A0A1B0GVY4 71 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 LOC285095A0A1B0GVY8 99 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 VILLO15195 856 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 KPNA6O60684 536 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 SUPT7LO94864 414 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 CDH13P55290 713 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 SH3BP2P78314 561 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 LSAMPQ13449 338 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 LAYNQ6UX15 382 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 ZNF598Q86UK7 904 aaKnown RBP10.96□□□□□ -0.66
BEST1-201ENST00000378043 ZNF280BQ86YH2 543 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 SLC22A9Q8IVM8 553 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 OR52K2Q8NGK3 314 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 TBATAQ96M53 351 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 SLC39A3Q9BRY0 314 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 ZYG11BQ9C0D3 744 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 SEMA6AQ9H2E6 1030 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 Q9H521 79 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 AP4S1Q9Y587 144 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 COMMD3-BMI1R4GMX3 469 aa10.96□□□□□ -0.66
BEST1-201ENST00000378043 A0A1B0GTW7 788 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 A0A1B0GVG6 124 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 NRP2O60462 931 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CSPG5O95196 566 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CLPTM1O96005 669 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 SPATA31D3P0C874 917 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 GRK4P32298 578 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
BEST1-201ENST00000378043 TBX4P57082 545 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CREB5Q02930 508 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 SEMA3AQ14563 771 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CST9Q5W186 159 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 FBXL22Q6P050 247 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 IYDQ6PHW0 289 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 SPATA31D4Q6ZUB0 917 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 AHI1Q8N157 1196 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 TTC9BQ8N6N2 239 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 LRTOMTQ8WZ04 291 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 MYEOVQ96EZ4 313 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 ZNF696Q9H7X3 374 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 SPAG4Q9NPE6 437 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 TMEM181Q9P2C4 612 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 DNAJC15Q9Y5T4 150 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 PTGDR2Q9Y5Y4 395 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CHD5Q8TDI0 1954 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 TCRBV3S1A0A5B6 114 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 LRRC14BA6NHZ5 514 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 MRASO14807 208 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 MUSKO15146 869 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 GPC4O75487 556 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 PENKP01210 267 aaPredicted RBP10.95□□□□□ -0.66
BEST1-201ENST00000378043 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
BEST1-201ENST00000378043 MTHFD2P13995 350 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CD1DP15813 335 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 ETFBP38117 255 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 SLC26A3P40879 764 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 PRAMEP78395 509 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 TNK2Q07912 1038 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 MAPRE2Q15555 327 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 NRF1Q16656 503 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 USP41Q3LFD5 358 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CYP2R1Q6VVX0 501 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CIR1Q86X95 450 aaPredicted RBP10.95□□□□□ -0.66
BEST1-201ENST00000378043 NUP93Q8N1F7 819 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 TOP1MTQ969P6 601 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 UROC1Q96N76 676 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 TRMOQ9BU70 441 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 COQ10BQ9H8M1 238 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 SP110Q9HB58 689 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 RGS18Q9NS28 235 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 GMIPQ9P107 970 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 EPS15L1Q9UBC2 864 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CNOT11Q9UKZ1 510 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms