RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 FBXO5Q9UKT4 447 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 INVSQ9Y283 1065 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 LCHNA4D1U4 455 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 WASH4PA8MWX3 477 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TCP10L2B9ZVM9 353 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 VAV1P15498 845 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GRSF1Q12849 480 aaKnown RBP eCLIP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 FSTL4Q6MZW2 842 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TSEN2Q8NCE0 465 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GPN2Q9H9Y4 310 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TSR3Q9UJK0 312 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TMCC2O75069 709 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 SLC35F1Q5T1Q4 408 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 BAIAP2L2Q6UXY1 529 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 LACC1Q8IV20 430 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GRIP1Q9Y3R0 1128 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PDZK1Q5T2W1 519 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 BSPRYQ5W0U4 402 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 SLC38A2Q96QD8 506 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ADNPQ9H2P0 1102 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ELOVL6Q9H5J4 265 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CNTN3Q9P232 1028 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF605Q86T29 641 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 RAVER2Q9HCJ3 691 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 DDIT4Q9NX09 232 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 LPOP22079 712 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CDCA2Q69YH5 1023 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PRKYO43930 277 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 FADS2O95864 444 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PSME3P61289 254 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TWF2Q6IBS0 349 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 B3GALT6Q96L58 329 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 OR52B2Q96RD2 323 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM245Q9H330 911 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 NT5DC2Q9H857 520 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 KLHL11Q9NVR0 708 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 LGR5O75473 907 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ARP10275 920 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GRIA4P48058 902 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 NFE2L1Q14494 772 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TOR1AIP1Q5JTV8 583 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 METAP1DQ6UB28 335 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF438Q7Z4V0 828 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ANXA5P08758 320 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 EPHB3P54753 998 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TRAF3Q13114 568 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 DSELQ8IZU8 1212 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 POLLQ9UGP5 575 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 IRAK3Q9Y616 596 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 FAM234BA2RU67 622 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CYB561D2O14569 222 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PTPN1P18031 435 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GALP22466 123 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 MRPS5P82675 430 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TMPRSS11AQ6ZMR5 421 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 LPGAT1Q92604 370 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 MYLK2Q9H1R3 596 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TBC1D14Q9P2M4 693 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 RALGPS2Q86X27 583 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CREB3L1Q96BA8 519 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 NUDT12Q9BQG2 462 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM260Q9NX78 707 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PLA2G4CQ9UP65 541 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 DCXO43602 365 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GSTT2BP0CG30 244 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 KLF10Q13118 480 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PCMTD2Q9NV79 361 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 AP2A2O94973 939 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 DHFRP00374 187 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 KHDC1Q4VXA5 237 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 USP45Q70EL2 814 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 SLITRK2Q9H156 845 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF275Q9NSD4 429 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 MGAT4DA6NG13 374 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CHRM3P20309 590 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 M6PRP20645 277 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PROX2Q3B8N5 592 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 DPY30Q9C005 99 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 FADS2P1A8MWK0 482 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 M0QYT0 321 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 RNF165Q6ZSG1 346 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 TLK2Q86UE8 772 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 SPPL2BQ8TCT7 592 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 DACH2Q96NX9 599 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CCDC32Q9BV29 185 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 C11orf91Q3C1V1 193 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PTRHD1Q6GMV3 140 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 C11orf65Q8NCR3 313 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 SLC22A18Q96BI1 424 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 C8GP07360 202 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GABARAPL2P60520 117 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 NAT14Q8WUY8 206 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 PRDM5Q9NQX1 630 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 KLHDC8BQ8IXV7 354 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 OR4A15Q8NGL6 344 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ITFG1Q8TB96 612 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 FAM120BQ96EK7 910 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 MFSD1Q9H3U5 465 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 NUFIP1Q9UHK0 495 aaKnown RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 CDC42BPBQ9Y5S2 1711 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms