RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 RBM44Q6ZP01 1051 aaKnown RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 MYO1HQ8N1T3 1032 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 PELI3Q8N2H9 469 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 ESAMQ96AP7 390 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 MAELQ96JY0 434 aaKnown RBP16.29■□□□□ 0.2
TRIM27-202ENST00000377199 BTBD9Q96Q07 612 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 GSTO2Q9H4Y5 243 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 RRAGCQ9HB90 399 aa16.29■□□□□ 0.2
TRIM27-202ENST00000377199 ANKRD12Q6UB98 2062 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 SNRPB2P08579 225 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 HOXC13P31276 330 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 CASP2P42575 452 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 HK2P52789 917 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 VPS26BQ4G0F5 336 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 ARTNQ5T4W7 220 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 CST9Q5W186 159 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 ZFP1Q6P2D0 407 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 ISCA2Q86U28 154 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 IFNEQ86WN2 208 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 NUP93Q8N1F7 819 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 TRPC4APQ8TEL6 797 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 NAT14Q8WUY8 206 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 PTCD2Q8WV60 388 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 TSPAN17Q96FV3 270 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 SUSD3Q96L08 255 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 RPL10LQ96L21 214 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 NOL11Q9H8H0 719 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 COQ10BQ9H8M1 238 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 KIF3CO14782 793 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 SCAMP3O14828 347 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 MUSKO15146 869 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 RAMP2O60895 175 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 TIPRLO75663 272 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 S1PR4O95977 384 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 SLC2A3P11169 496 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 PBX3P40426 434 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 ARL1P40616 181 aaPredicted RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 GRIA3P42263 894 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 STX1BP61266 288 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 SH3BP2P78314 561 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 TRIM25Q14258 630 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 SEMA3AQ14563 771 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 RBBP5Q15291 538 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 KCNA10Q16322 511 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 HABP4Q5JVS0 413 aaKnown RBP16.28■□□□□ 0.2
TRIM27-202ENST00000377199 MFN1Q8IWA4 741 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 TRIB2Q92519 343 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 FBXO32Q969P5 355 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 C19orf60Q96EN9 201 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 SPON2Q9BUD6 331 aa16.28■□□□□ 0.2
TRIM27-202ENST00000377199 LINC00032P0C843 101 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 CKMT2P17540 419 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 MYBPC1Q00872 1141 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 SQLEQ14534 574 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 ZNF235Q14590 738 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 ACAP2Q15057 778 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 SLC5A9Q2M3M2 681 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 MGAT5BQ3V5L5 792 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 MRPL10Q7Z7H8 261 aaKnown RBP16.27■□□□□ 0.2
TRIM27-202ENST00000377199 LCA5Q86VQ0 697 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 SPAG4Q9NPE6 437 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 SEMA4BQ9NPR2 832 aaPredicted RBP16.27■□□□□ 0.2
TRIM27-202ENST00000377199 GABRQQ9UN88 632 aa16.27■□□□□ 0.2
TRIM27-202ENST00000377199 A0A1B0GTL3 188 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 FAM149AA5PLN7 773 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 AKAP10O43572 662 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 TSPAN3O60637 253 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 SNUPNO95149 360 aaKnown RBP16.27■□□□□ 0.19
TRIM27-202ENST00000377199 GLP2RO95838 553 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 ALDOCP09972 364 aaKnown RBP16.27■□□□□ 0.19
TRIM27-202ENST00000377199 SMIM18P0DKX4 95 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 UGT1A6P19224 532 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 CES1P23141 567 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 DNAJB13P59910 316 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 YBX1P67809 324 aaKnown RBP16.27■□□□□ 0.19
TRIM27-202ENST00000377199 MGAT3Q09327 533 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 ZNF678Q5SXM1 525 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 KIAA0408Q6ZU52 694 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 MON1AQ86VX9 555 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 HERC6Q8IVU3 1022 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 ASB9Q96DX5 294 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 AKTIPQ9H8T0 292 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 MEAF6Q9HAF1 191 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 DDX18Q9NVP1 670 aaKnown RBP16.27■□□□□ 0.19
TRIM27-202ENST00000377199 TLR6Q9Y2C9 796 aa16.27■□□□□ 0.19
TRIM27-202ENST00000377199 A0A0D9SEW6 157 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 PRSS51A0A1B0GVH4 220 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 CCDC162PA2VCL2 907 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 NRP2O60462 931 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 SRP72O76094 671 aaKnown RBP16.26■□□□□ 0.19
TRIM27-202ENST00000377199 RPL10P27635 214 aaKnown RBP16.26■□□□□ 0.19
TRIM27-202ENST00000377199 LRP8Q14114 963 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 GRB7Q14451 532 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 HERC3Q15034 1050 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 NADK2Q4G0N4 442 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 GIPC2Q8TF65 315 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 TUBGCP3Q96CW5 907 aa16.26■□□□□ 0.19
TRIM27-202ENST00000377199 UBXN10Q96LJ8 280 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms