RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TAF10Q12962 218 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 RBBP7Q16576 425 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 BRMS1LQ5PSV4 323 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 FBXL22Q6P050 247 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 SPPL2CQ8IUH8 684 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 LGI2Q8N0V4 545 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 FAM110BQ8TC76 370 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 C3orf30Q96M34 536 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 GPR78Q96P69 363 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 IL12RB2Q99665 862 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 IGSF5Q9NSI5 407 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 RNF112Q9ULX5 631 aa12.96□□□□□ -0.33
USP11-204ENST00000377107 PRORSD1PA6NEY8 169 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 A8MX80 341 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 H3BMM5 538 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 FAM58BPP0C7Q3 252 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 HGFP14210 728 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 CA8P35219 290 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 CDH15P55291 814 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 FOXA1P55317 472 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 KCNA10Q16322 511 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 TAF12Q16514 161 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 KIAA0930Q6ICG6 404 aaPredicted RBP12.96□□□□□ -0.34
USP11-204ENST00000377107 C16orf59Q7L2K0 433 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 VPS33AQ96AX1 596 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 SEPHS2Q99611 448 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 SLC25A51Q9H1U9 297 aa12.96□□□□□ -0.34
USP11-204ENST00000377107 CBX4O00257 560 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 NRP2O60462 931 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 NDUFS3O75489 264 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 TECRLQ5HYJ1 363 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CYGBQ8WWM9 190 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 PGAP3Q96FM1 320 aaPredicted RBP12.95□□□□□ -0.34
USP11-204ENST00000377107 HIC2Q96JB3 615 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 A0A0D9SEW6 157 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CCDC162PA2VCL2 907 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 PIP5K1BO14986 540 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 COL6A2P12110 1019 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 NCK1P16333 377 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 KCNQ1P51787 676 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 NADK2Q4G0N4 442 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 BNIPLQ7Z465 357 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 DHFR2Q86XF0 187 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 ARHGAP18Q8N392 663 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 KLHDC9Q8NEP7 349 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CANT1Q8WVQ1 401 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 C19orf60Q96EN9 201 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CCDC28BQ9BUN5 200 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 EFHD1Q9BUP0 239 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 AKTIPQ9H8T0 292 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
USP11-204ENST00000377107 SPAG4Q9NPE6 437 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CACNA2D2Q9NY47 1150 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 LAMA3Q16787 3333 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 A0A0J9YYE9 177 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 ENPP3O14638 875 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 INPP4BO15327 924 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CD3EAPO15446 510 aaKnown RBP12.95□□□□□ -0.34
USP11-204ENST00000377107 B4GALT3O60512 393 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CLIC3O95833 236 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CLCN5P51795 746 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 MAPK10P53779 464 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 TRIM25Q14258 630 aaKnown RBP12.95□□□□□ -0.34
USP11-204ENST00000377107 MAPRE2Q15555 327 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 ZRANB3Q5FWF4 1079 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 MS4A13Q5J8X5 152 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 TBCELQ5QJ74 424 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 MORN1Q5T089 497 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 LIMS2Q7Z4I7 341 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 CILP2Q8IUL8 1156 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 ZNF786Q8N393 782 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 GRIN3AQ8TCU5 1115 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 IRGQQ8WZA9 623 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 PTERQ96BW5 349 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 ZNF512Q96ME7 567 aaPredicted RBP12.95□□□□□ -0.34
USP11-204ENST00000377107 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
USP11-204ENST00000377107 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 SMPD4Q9NXE4 827 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 PCDHGC4Q9Y5F7 938 aa12.95□□□□□ -0.34
USP11-204ENST00000377107 UBFD1O14562 309 aaKnown RBP12.94□□□□□ -0.34
USP11-204ENST00000377107 KATNA1O75449 491 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 HSPA8P11142 646 aaKnown RBP12.94□□□□□ -0.34
USP11-204ENST00000377107 SATB1Q01826 763 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 TWF1Q12792 350 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 GRB7Q14451 532 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 MFSD14CQ5VZR4 134 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 MRNIPQ6NTE8 343 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 TMEM207Q6UWW9 146 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 MFN1Q8IWA4 741 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 TRPV1Q8NER1 839 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 LPCAT1Q8NF37 534 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 ISL2Q96A47 359 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 ACOX2Q99424 681 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 TRIM62Q9BVG3 475 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
USP11-204ENST00000377107 BTN3A1O00481 513 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms