RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 DDX53Q86TM3 631 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 PLD6Q8N2A8 252 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 SLC15A4Q8N697 577 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 PCDH20Q8N6Y1 951 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 C12orf29Q8N999 325 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 ADAMTS16Q8TE57 1224 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 TFAP2CQ92754 450 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 ERLEC1Q96DZ1 483 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 MOCOSQ96EN8 888 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 EFHD1Q9BUP0 239 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 NT5C1AQ9BXI3 368 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 RAB6CQ9H0N0 254 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 ACSS2Q9NR19 701 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 SNX15Q9NRS6 342 aa15.12■□□□□ 0.01
CCHCR1-201ENST00000376266 PRPSAP2O60256 369 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 SOD2P04179 222 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 GNAO1P09471 354 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TTKP33981 857 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 PSME3P61289 254 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 KCNC4Q03721 635 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TRAF2Q12933 501 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 RAB39AQ14964 217 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 CDO1Q16878 200 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TRIM16LQ309B1 348 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 STEAP4Q687X5 459 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 THOC7Q6I9Y2 204 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 PRSS55Q6UWB4 352 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 PQLC3Q8N755 202 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TERB1Q8NA31 727 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TMEM176AQ96HP8 235 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 ZBTB26Q9HCK0 441 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 ATAD3AQ9NVI7 634 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 PIH1D1Q9NWS0 290 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 ERGIC3Q9Y282 383 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 SZT2Q5T011 3432 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 CARNS1A5YM72 827 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 SOCS2O14508 198 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 NOL3O60936 208 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 OAZ2O95190 189 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TGM2P21980 687 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 DNAJB2P25686 324 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 ADSLP30566 484 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 RPL14P50914 215 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 SESN2P58004 480 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 RAB30Q15771 203 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 PPP2R2DQ66LE6 453 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 KIAA1841Q6NSI8 718 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 SCYL2Q6P3W7 929 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 C4orf22Q6V702 233 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 CYP2R1Q6VVX0 501 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 CHSY3Q70JA7 882 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 UNC93AQ86WB7 457 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TTC39CQ8N584 583 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 CNTD1Q8N815 330 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 OR10T2Q8NGX3 314 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 AUTS2Q8WXX7 1259 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 LPGAT1Q92604 370 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 SLCO4A1Q96BD0 722 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 ATXN7L3BQ96GX2 97 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 HEXIM2Q96MH2 286 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 TMEM209Q96SK2 561 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 DOK1Q99704 481 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 GATA5Q9BWX5 397 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 NAA50Q9GZZ1 169 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 POLR1BQ9H9Y6 1135 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 GPATCH2LQ9NWQ4 482 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 COLQQ9Y215 455 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 RWDD3Q9Y3V2 267 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 CORINQ9Y5Q5 1042 aa15.11■□□□□ 0.01
CCHCR1-201ENST00000376266 G3V2L1 256 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 AKAP10O43572 662 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 KPNA1P52294 538 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 FAM102AQ5T9C2 384 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 HMBOX1Q6NT76 420 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 PPP4R4Q6NUP7 873 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 TRUB1Q8WWH5 349 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 TANKQ92844 425 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 FAM124BQ9H5Z6 455 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 SLC28A3Q9HAS3 691 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 MRPL40Q9NQ50 206 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 SUCOQ9UBS9 1254 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 CDYLQ9Y232 598 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 RAP2CQ9Y3L5 183 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 NLRC5Q86WI3 1866 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 TSC2P49815 1807 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 TRIOBPQ9H2D6 2365 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 C1orf232A0A0U1RR37 186 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 CCDC162PA2VCL2 907 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 TCAF2A6NFQ2 919 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 TIPRLO75663 272 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 SLC7A1P30825 629 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 GNA12Q03113 381 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 PRKCQQ04759 706 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 MRPL58Q14197 206 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 BSPRYQ5W0U4 402 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 CDKL3Q8IVW4 592 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 THEM5Q8N1Q8 247 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 TAMM41Q96BW9 452 aa15.1■□□□□ 0.01
CCHCR1-201ENST00000376266 LHX5Q9H2C1 402 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms