RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CREB5Q02930 508 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 LAMB3Q13751 1172 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 APOFQ13790 326 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 ADRM1Q16186 407 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 UNC50Q53HI1 259 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 PIK3R6Q5UE93 754 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 CYHR1Q6ZMK1 362 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 GALNT7Q86SF2 657 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 DHFR2Q86XF0 187 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 ZNF354CQ86Y25 554 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 SCN4BQ8IWT1 228 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 CLYBLQ8N0X4 340 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 PPWD1Q96BP3 646 aaKnown RBP14.59□□□□□ -0.07
MSH5-201ENST00000375703 L3HYPDHQ96EM0 354 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 HMCESQ96FZ2 354 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 DUS3LQ96G46 650 aaKnown RBP14.59□□□□□ -0.07
MSH5-201ENST00000375703 C3orf30Q96M34 536 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 OSBPL11Q9BXB4 747 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 SENP6Q9GZR1 1112 aaPredicted RBP14.59□□□□□ -0.07
MSH5-201ENST00000375703 RBM38Q9H0Z9 239 aaKnown RBP14.59□□□□□ -0.07
MSH5-201ENST00000375703 MFSD1Q9H3U5 465 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 NOL11Q9H8H0 719 aaKnown RBP14.59□□□□□ -0.07
MSH5-201ENST00000375703 HACD3Q9P035 362 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 PADI4Q9UM07 663 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 DMTF1Q9Y222 760 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 RNF11Q9Y3C5 154 aa14.59□□□□□ -0.07
MSH5-201ENST00000375703 MTF2Q9Y483 593 aaPredicted RBP14.59□□□□□ -0.07
MSH5-201ENST00000375703 ARHGAP10A1A4S6 786 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 MROH6A6NGR9 719 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 OR51F1A6NGY5 319 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 PENKP01210 267 aaPredicted RBP14.58□□□□□ -0.07
MSH5-201ENST00000375703 HSPA8P11142 646 aaKnown RBP14.58□□□□□ -0.07
MSH5-201ENST00000375703 SLC26A3P40879 764 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 CDH13P55290 713 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 NRG1Q02297 640 aaPredicted RBP14.58□□□□□ -0.07
MSH5-201ENST00000375703 MAP7D1Q3KQU3 841 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 MTX3Q5HYI7 312 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 HACD2Q6Y1H2 254 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 CHERPQ8IWX8 916 aaKnown RBP14.58□□□□□ -0.07
MSH5-201ENST00000375703 UMODL1-AS1Q8N2C9 162 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 OR52K2Q8NGK3 314 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 C19orf60Q96EN9 201 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 SERPINB11Q96P15 392 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 SLC29A1Q99808 456 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 SLC39A3Q9BRY0 314 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 SPON1Q9HCB6 807 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 FNIP2Q9P278 1114 aa14.58□□□□□ -0.07
MSH5-201ENST00000375703 MARCH4Q9P2E8 410 aaPredicted RBP14.58□□□□□ -0.07
MSH5-201ENST00000375703 MYLKQ15746 1914 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 SLC4A1P02730 911 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 ASLP04424 464 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 MMP2P08253 660 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 HAPLN1P10915 354 aaPredicted RBP14.58□□□□□ -0.08
MSH5-201ENST00000375703 ACADVLP49748 655 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 ATP4BP51164 291 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 SLC7A2P52569 658 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 NDST2P52849 883 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 TXNL4AP83876 142 aaKnown RBP14.58□□□□□ -0.08
MSH5-201ENST00000375703 SPRYD7Q5W111 196 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 GDF6Q6KF10 455 aaPredicted RBP14.58□□□□□ -0.08
MSH5-201ENST00000375703 ARHGAP22Q7Z5H3 698 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 PIM3Q86V86 326 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 FUNDC1Q8IVP5 155 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 RYBPQ8N488 228 aaPredicted RBP14.58□□□□□ -0.08
MSH5-201ENST00000375703 PCYOX1LQ8NBM8 494 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 SH3RF2Q8TEC5 729 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 CIB1Q99828 191 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 TMEM79Q9BSE2 394 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 AKTIPQ9H8T0 292 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 RGS18Q9NS28 235 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 KCTD3Q9Y597 815 aa14.58□□□□□ -0.08
MSH5-201ENST00000375703 COL4A4P53420 1690 aaPredicted RBP14.58□□□□□ -0.08
MSH5-201ENST00000375703 MYADML2A6NDP7 307 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 WISP3O95389 354 aaPredicted RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 ITGB1P05556 798 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 HERVK_113P63132 956 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 IHHQ14623 411 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 KIF19Q2TAC6 998 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 UGT3A2Q3SY77 523 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 PITRM1Q5JRX3 1037 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 SIRPB2Q5JXA9 342 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 C6orf10Q5SRN2 563 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 C8orf82Q6P1X6 216 aaPredicted RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 MYO1HQ8N1T3 1032 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 TRIML2Q8N7C3 387 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 TSPAN14Q8NG11 270 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 EXT2Q93063 718 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 PTERQ96BW5 349 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 ERVK-6Q9BXR3 956 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 SP110Q9HB58 689 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 KLHL33A6NCF5 533 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 ZNF623O75123 536 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 ALDOCP09972 364 aaKnown RBP14.57□□□□□ -0.08
MSH5-201ENST00000375703 OR4Q2P0C623 313 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 GPX3P22352 226 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 SH3BP2P78314 561 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 GNASQ5JWF2 1037 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 HMBOX1Q6NT76 420 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 PSMG2Q969U7 264 aa14.57□□□□□ -0.08
MSH5-201ENST00000375703 ROPN1LQ96C74 230 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms