RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SLC22A3O75751 556 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 GSNP06396 782 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ALDH4A1P30038 563 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ESRP1Q6NXG1 681 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 KBTBD2Q8IY47 623 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TMEM86AQ8N2M4 240 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZCCHC7Q8N3Z6 543 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 MAB21L3Q8N8X9 362 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 OR6K2Q8NGY2 324 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 OR4L1Q8NH43 312 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PNPT1Q8TCS8 783 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 FNIP1Q8TF40 1166 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 UBASH3BQ8TF42 649 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 MARCH2Q9P0N8 246 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 UXTQ9UBK9 157 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 COQ4Q9Y3A0 265 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF197O14709 1029 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PIP5K1BO14986 540 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ALOX15P16050 662 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 POLR2JP52435 117 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CDH15P55291 814 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 WNT3AP56704 352 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 IL2P60568 153 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 GPR142Q7Z601 462 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PIM3Q86V86 326 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 STX19Q8N4C7 294 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF483Q8TF39 744 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 GLOD4Q9HC38 313 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PCDH12Q9NPG4 1184 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 STK39Q9UEW8 545 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PADI4Q9UM07 663 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TCAF1Q9Y4C2 921 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 FGFR1P11362 822 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 RRM2P31350 389 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ACTR3P61158 418 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PSMD5Q16401 504 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 NADK2Q4G0N4 442 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TPGS1Q6ZTW0 290 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 RRM2BQ7LG56 351 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 TREML1Q86YW5 311 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 ENDOVQ8N8Q3 282 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 EZH1Q92800 747 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 REXO5Q96IC2 774 aaKnown RBP6.56□□□□□ -1.36
SMC1A-202ENST00000375340 CYP2S1Q96SQ9 504 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PKP2Q99959 881 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 EPB41L1Q9H4G0 881 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 OPTCQ9UBM4 332 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 PSAT1Q9Y617 370 aa6.56□□□□□ -1.36
SMC1A-202ENST00000375340 MLNP12872 115 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 CCNA2P20248 432 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 SYPL2Q5VXT5 272 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 DEFB128Q7Z7B8 93 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 ADCY4Q8NFM4 1077 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 PPM1MQ96MI6 270 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 APOL4Q9BPW4 351 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 OSBPL6Q9BZF3 934 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 LEF1Q9UJU2 399 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-202ENST00000375340 PRR23AA6NEV1 266 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 DLDP09622 509 aaKnown RBP6.55□□□□□ -1.36
SMC1A-202ENST00000375340 MAGP20916 626 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 MC4RP32245 332 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 HUNKP57058 714 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 BNIP2Q12982 314 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 RSBN1Q5VWQ0 802 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-202ENST00000375340 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 PQLC3Q8N755 202 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 GRIN3AQ8TCU5 1115 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 MLPHQ9BV36 600 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-202ENST00000375340 ZYG11BQ9C0D3 744 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 RAD21L1Q9H4I0 556 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 GBA2Q9HCG7 927 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-202ENST00000375340 FETUBQ9UGM5 382 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 H3BMM5 538 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 UBXN8O00124 270 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 IDO1P14902 403 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 CRATP43155 626 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 ALDH7A1P49419 539 aaKnown RBP6.55□□□□□ -1.36
SMC1A-202ENST00000375340 MADCAM1Q13477 382 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 SLC10A6Q3KNW5 377 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 ZNF280DQ6N043 979 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 KCTD8Q6ZWB6 473 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 SLCO6A1Q86UG4 719 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 TOP6BLQ8N6T0 577 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 MCRS1Q96EZ8 462 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 MIPEPQ99797 713 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 ADAM2Q99965 735 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 FBXO44Q9H4M3 255 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 DYRK4Q9NR20 520 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 OGDHLQ9ULD0 1010 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 TRIM43BA6NCK2 446 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 IQCA1LA6NCM1 817 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 FESP07332 822 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 CCR3P51677 355 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 GRIK3Q13003 919 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 TTLL9Q3SXZ7 439 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 NAT16Q8N8M0 369 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 STAG3L4Q8TBR4 150 aa6.55□□□□□ -1.36
SMC1A-202ENST00000375340 NRG4Q8WWG1 115 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms