RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ARFIP2P53365 341 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 ZNF33AQ06730 810 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 PDGFRLQ15198 375 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 CCDC6Q16204 474 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 DBN1Q16643 649 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 ITPRIPL2Q3MIP1 535 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 SLC44A4Q53GD3 710 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 SH2D4BQ5SQS7 431 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 FBXL22Q6P050 247 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 PACS1Q6VY07 963 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
HMGA1-203ENST00000374116 SFTPA1Q8IWL2 248 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 KLHDC8BQ8IXV7 354 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 CENPKQ9BS16 269 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 SYBUQ9NX95 663 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 MPP6Q9NZW5 540 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 SIRPGQ9P1W8 387 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 DCTN4Q9UJW0 460 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 PIAS3Q9Y6X2 628 aa14.37□□□□□ -0.11
HMGA1-203ENST00000374116 KCNK1O00180 336 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 TBL1XO60907 577 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 CNTN5O94779 1100 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 NFATC1O95644 943 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 PDGFBP01127 241 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ADH5P11766 374 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 TYRP14679 529 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 CRADDP78560 199 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 NRG1Q02297 640 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 FRG1Q14331 258 aaKnown RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 KHDC1Q4VXA5 237 aaKnown RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 C1QTNF12Q5T7M4 302 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ACBD5Q5T8D3 534 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 KCTD11Q693B1 232 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ITPRIPL1Q6GPH6 555 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 MTDHQ86UE4 582 aaKnown RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 NUDCD3Q8IVD9 361 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 SIX5Q8N196 739 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 WFDC5Q8TCV5 224 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 C7orf26Q96N11 449 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 RPRD1AQ96P16 312 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ZNF184Q99676 751 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 EPB41L1Q9H4G0 881 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 SLC2A4RGQ9NR83 387 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 STOML2Q9UJZ1 356 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 A0A0G2JND7 137 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 SHISA7A6NL88 538 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 H0Y3Z8 333 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 MAP3K7O43318 606 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ATP9BO43861 1147 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 DNAJC6O75061 913 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 PSMG1O95456 288 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 LYNP07948 512 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 DLDP09622 509 aaKnown RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 CD68P34810 354 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 MLLT6P55198 1093 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-203ENST00000374116 ZXDAP98168 799 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 CDK18Q07002 472 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 RCN1Q15293 331 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 LIN52Q52LA3 116 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 TPRG1Q6ZUI0 275 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 CLNKQ7Z7G1 428 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 FAM217AQ8IXS0 508 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 CPA6Q8N4T0 437 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 TSGA13Q96PP4 275 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 GBA3Q9H227 469 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 LRRC40Q9H9A6 602 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 KCNK13Q9HB14 408 aa14.36□□□□□ -0.11
HMGA1-203ENST00000374116 E9PAM4 449 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 F5H5T6 163 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 CACNG3O60359 315 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 CCDC22O60826 627 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 BPGMP07738 259 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 HOXD9P28356 352 aaPredicted RBP14.35□□□□□ -0.11
HMGA1-203ENST00000374116 CTHP32929 405 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 TMPRSS15P98073 1019 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 KDSRQ06136 332 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 PON2Q15165 354 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 TEX44Q53QW1 395 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 ALFQ53S48 1182 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 RWDD4Q6NW29 188 aaKnown RBP14.35□□□□□ -0.11
HMGA1-203ENST00000374116 TFAP2DQ7Z6R9 452 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 ARHGAP12Q8IWW6 846 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 UNC5BQ8IZJ1 945 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 OTUB2Q96DC9 234 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 MIPEPQ99797 713 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 TMEM120AQ9BXJ8 343 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 CASS4Q9NQ75 786 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 BFARQ9NZS9 450 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 HEY2Q9UBP5 337 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 DCDC2Q9UHG0 476 aa14.35□□□□□ -0.11
HMGA1-203ENST00000374116 MTF2Q9Y483 593 aaPredicted RBP14.35□□□□□ -0.11
HMGA1-203ENST00000374116 MAGEB16A2A368 324 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 SPECC1L-ADORA2AF8WAN1 911 aa14.34□□□□□ -0.11
HMGA1-203ENST00000374116 AP3B1O00203 1094 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms