RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TECRLQ5HYJ1 363 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 VWA5B1Q5TIE3 1220 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 ZNF549Q6P9A3 640 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 MFN1Q8IWA4 741 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 TDRD5Q8NAT2 981 aaKnown RBP19.63■□□□□ 0.73
HDAC1-201ENST00000373548 OR4K2Q8NGD2 314 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 SH3RF2Q8TEC5 729 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 SLC22A17Q8WUG5 538 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 UBXN10Q96LJ8 280 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 MIPEPQ99797 713 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 CCDC106Q9BWC9 280 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 SH3BP1Q9Y3L3 701 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 HELZP42694 1942 aaKnown RBP19.63■□□□□ 0.73
HDAC1-201ENST00000373548 TRAV19A0A0A6YYK7 116 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 CSPG5O95196 566 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 MT-CO1P00395 513 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 LTA4HP09960 611 aaKnown RBP19.63■□□□□ 0.73
HDAC1-201ENST00000373548 CCDC166P0CW27 439 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 MYL4P12829 197 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 OGNP20774 298 aaKnown RBP19.63■□□□□ 0.73
HDAC1-201ENST00000373548 PSMA3P25788 255 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 RHOAP61586 193 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 RCN2Q14257 317 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 FAM45BPQ6NSW5 357 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 TMEM207Q6UWW9 146 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 APCDD1Q8J025 514 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 CPXM2Q8N436 756 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 FAM45AQ8TCE6 357 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 DDI1Q8WTU0 396 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 ANKRD49Q8WVL7 239 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 SGF29Q96ES7 293 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 TCF25Q9BQ70 676 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 CORO1BQ9BR76 489 aa19.63■□□□□ 0.73
HDAC1-201ENST00000373548 APOBEC2Q9Y235 224 aaKnown RBP19.63■□□□□ 0.73
HDAC1-201ENST00000373548 MTF2Q9Y483 593 aaPredicted RBP19.63■□□□□ 0.73
HDAC1-201ENST00000373548 ANKRD66B4E2M5 251 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 PRSS56P0CW18 603 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 HSPA8P11142 646 aaKnown RBP19.62■□□□□ 0.73
HDAC1-201ENST00000373548 ESRRAP11474 423 aaPredicted RBP19.62■□□□□ 0.73
HDAC1-201ENST00000373548 MPSTP25325 297 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 CDC25CP30307 473 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 SLC8A1P32418 973 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 PPIGQ13427 754 aaKnown RBP eCLIP19.62■□□□□ 0.738e-8■■■■□ 21.6
HDAC1-201ENST00000373548 TYSND1Q2T9J0 566 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 AGAP9Q5VTM2 703 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 PIM3Q86V86 326 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 LONP2Q86WA8 852 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 ELMOD1Q8N336 334 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 TXNDC5Q8NBS9 432 aaKnown RBP19.62■□□□□ 0.73
HDAC1-201ENST00000373548 SCG3Q8WXD2 468 aaKnown RBP19.62■□□□□ 0.73
HDAC1-201ENST00000373548 BADQ92934 168 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 ADGRE3Q9BY15 652 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 ILKAPQ9H0C8 392 aaPredicted RBP19.62■□□□□ 0.73
HDAC1-201ENST00000373548 BAIAP2L1Q9UHR4 511 aa19.62■□□□□ 0.73
HDAC1-201ENST00000373548 HIDE1A8MVS5 230 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 K7ERQ8 282 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 CCL16O15467 120 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 FDXRP22570 491 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 STC1P52823 247 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 UBAP2LQ14157 1087 aaKnown RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 ARL13AQ5H913 290 aaPredicted RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 ATXN7L2Q5T6C5 722 aaPredicted RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 RINLQ6ZS11 566 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 PDCD6IPQ8WUM4 868 aaKnown RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 SLC46A2Q9BY10 475 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 PLK2Q9NYY3 685 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 CORO1CQ9ULV4 474 aaPredicted RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 CLEC4EQ9ULY5 219 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 ZNF510Q9Y2H8 683 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 RAP2CQ9Y3L5 183 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 IRAK3Q9Y616 596 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 LAMA2P24043 3122 aaKnown RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 LCHNA4D1U4 455 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 C2orf81A6NN90 581 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 PIGNO95427 931 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 GLUD1P00367 558 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 SLC4A1P02730 911 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 ENO1P06733 434 aaKnown RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 TIAL1Q01085 375 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■□□□□ 9
HDAC1-201ENST00000373548 ILF2Q12905 390 aaKnown RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 PTPRRQ15256 657 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 SDCCAG8Q86SQ7 713 aaPredicted RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 LSMEM2Q8N112 164 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 AGR3Q8TD06 166 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 GCNAQ96QF7 691 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 BTBD10Q9BSF8 475 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 SMG9Q9H0W8 520 aaKnown RBP19.61■□□□□ 0.73
HDAC1-201ENST00000373548 COG4Q9H9E3 785 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 ASAH2Q9NR71 780 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 HCFC1R1Q9NWW0 138 aa19.61■□□□□ 0.73
HDAC1-201ENST00000373548 ALPK3Q96L96 1907 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 NEMP2A6NFY4 417 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 PRR5-ARHGAP8B1AHC4 643 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 DIAPH2O60879 1101 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 LPOP22079 712 aaPredicted RBP19.6■□□□□ 0.73
HDAC1-201ENST00000373548 ATP5F1P24539 256 aaPredicted RBP19.6■□□□□ 0.73
HDAC1-201ENST00000373548 CCR2P41597 374 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 ABL2P42684 1182 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 ARHGAP8P85298 464 aa19.6■□□□□ 0.73
HDAC1-201ENST00000373548 PFKPQ01813 784 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms