RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 LY6KQ17RY6 165 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 SPATS1Q496A3 300 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 AGKQ53H12 422 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 PRMT9Q6P2P2 845 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 HACE1Q8IYU2 909 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 KDM1BQ8NB78 822 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 RNF149Q8NC42 400 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 RHOXF1Q8NHV9 184 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 TFAP2BQ92481 460 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 TSNARE1Q96NA8 513 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 HOPXQ9BPY8 73 aaPredicted RBP18.37■□□□□ 0.53
MMP9-201ENST00000372330 CNPY3Q9BT09 278 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 EMILIN2Q9BXX0 1053 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 SPATC1LQ9H0A9 340 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 ANKHQ9HCJ1 492 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 ZNF639Q9UID6 485 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 ANKRD6Q9Y2G4 727 aa18.37■□□□□ 0.53
MMP9-201ENST00000372330 MTF2Q9Y483 593 aaPredicted RBP18.37■□□□□ 0.53
MMP9-201ENST00000372330 E2F8A0AVK6 867 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 TTC24A2A3L6 582 aaPredicted RBP18.36■□□□□ 0.53
MMP9-201ENST00000372330 CCDC78A2IDD5 438 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 SAGE2PA6NJ88 616 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 TAF4O00268 1085 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 GAS2O43903 313 aaKnown RBP18.36■□□□□ 0.53
MMP9-201ENST00000372330 DDHD2O94830 711 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 SNAP29O95721 258 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 PRKCBP05771 671 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 LRPAP1P30533 357 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 GPD2P43304 727 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 GABARAPL2P60520 117 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.36■□□□□ 0.53
MMP9-201ENST00000372330 DENND1BQ6P3S1 775 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 ZBTB8OSQ8IWT0 167 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 LSMEM2Q8N112 164 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 CXorf38Q8TB03 319 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 HDAC2Q92769 488 aaKnown RBP18.36■□□□□ 0.53
MMP9-201ENST00000372330 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
MMP9-201ENST00000372330 MUL1Q969V5 352 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 LRRC40Q9H9A6 602 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 AP4E1Q9UPM8 1137 aa18.36■□□□□ 0.53
MMP9-201ENST00000372330 TIMM44O43615 452 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 TPPPO94811 219 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 FYNP06241 537 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 MYL3P08590 195 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 BMP1P13497 986 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 HSD17B1P14061 328 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 HTR1BP28222 390 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 ELK4P28324 431 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 RFC2P35250 354 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 GMPRP36959 345 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 CASP3P42574 277 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 C19orf57Q0VDD7 668 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 KRR1Q13601 381 aaKnown RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 POLD3Q15054 466 aaPredicted RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 HSDL1Q3SXM5 330 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 CCDC81Q6ZN84 652 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 CYP4V2Q6ZWL3 525 aaPredicted RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 RAVER1Q8IY67 606 aaKnown RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 EGLN2Q96KS0 407 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 MUS81Q96NY9 551 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 DHX35Q9H5Z1 703 aaKnown RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 EIF2B3Q9NR50 452 aaKnown RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 CCDC167Q9P0B6 97 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 MN1Q10571 1320 aaPredicted RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 UBDO15205 165 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 TEX28O15482 410 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 NADKO95544 446 aaPredicted RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 ERVK-10P10266 1014 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 DNAJB1P25685 340 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 AXLP30530 894 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 TFAMQ00059 246 aaKnown RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 ZNF181Q2M3W8 571 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 FAM182AQ5T1J6 154 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 RSBN1Q5VWQ0 802 aaPredicted RBP18.35■□□□□ 0.53
MMP9-201ENST00000372330 TAF2Q6P1X5 1199 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 THAP5Q7Z6K1 395 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 STRA8Q7Z7C7 330 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 SPPL2CQ8IUH8 684 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 TBC1D21Q8IYX1 336 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 ADGRG5Q8IZF4 528 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 LRRC71Q8N4P6 559 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 SIMC1Q8NDZ2 872 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 MCRS1Q96EZ8 462 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 RHOBTB2Q9BYZ6 727 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 SPC25Q9HBM1 224 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 LRRC4Q9HBW1 653 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 NPAP1Q9NZP6 1156 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 N6AMT1Q9Y5N5 214 aa18.35■□□□□ 0.53
MMP9-201ENST00000372330 ZNF487B1APH4 448 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 TPST1O60507 370 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 UPK1BO75841 260 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 GABARAPO95166 117 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 PTTG1O95997 202 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 HOXC6P09630 235 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 MGAT1P26572 445 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 GRIK1P39086 918 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 NR2C2P49116 596 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 P2RX3P56373 397 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 ADCK1Q86TW2 530 aa18.34■□□□□ 0.53
MMP9-201ENST00000372330 FAM20CQ8IXL6 584 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms