RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PGAM1P18669 254 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 VIPR1P32241 457 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 HMGCLP35914 325 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 MMP12P39900 470 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 ABL2P42684 1182 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 CRADDP78560 199 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 MTAPQ13126 283 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 FASTKD3Q14CZ7 662 aaKnown RBP15.88■□□□□ 0.13
TMEM53-204ENST00000372243 AGBL4Q5VU57 503 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 CASC4Q6P4E1 433 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 CRTC1Q6UUV9 634 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 GLT6D1Q7Z4J2 308 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 RASSF3Q86WH2 238 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 RAVER1Q8IY67 606 aaKnown RBP15.88■□□□□ 0.13
TMEM53-204ENST00000372243 HDDC3Q8N4P3 179 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 TSTD1Q8NFU3 115 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 TTC25Q96NG3 672 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 SMIM14Q96QK8 99 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 OMDQ99983 421 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 POLR3BQ9NW08 1133 aaPredicted RBP15.88■□□□□ 0.13
TMEM53-204ENST00000372243 C2orf42Q9NWW7 574 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 FBXL12Q9NXK8 326 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 B4GALT6Q9UBX8 382 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
TMEM53-204ENST00000372243 H0Y858 1186 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 RNASEH2AO75792 299 aaKnown RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 USP1O94782 785 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 POLBP06746 335 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 GSTA2P09210 222 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 TSHRP16473 764 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 PSMA3P25788 255 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 CCR3P51677 355 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 FAM193AP78312 1265 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 DENND2CQ68D51 928 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 TRMT10CQ7L0Y3 403 aaKnown RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 IGDCC3Q8IVU1 814 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 TTC30BQ8N4P2 665 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 SLC6A17Q9H1V8 727 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 CDC42EP4Q9H3Q1 356 aaKnown RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 ITM2CQ9NQX7 267 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 CHRAC1Q9NRG0 131 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 ZC3H7BQ9UGR2 993 aaKnown RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 CHMP2BQ9UQN3 213 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 NCKAP1Q9Y2A7 1128 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 FADS3Q9Y5Q0 445 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 BDP1A6H8Y1 2624 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 C1orf232A0A0U1RR37 186 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 A0A1W2PP55 124 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 PSMD11O00231 422 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 SPINT1O43278 529 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 PI15O43692 258 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 APBB3O95704 486 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 IGLV3-19P01714 112 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 LPOP22079 712 aaPredicted RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 LHCGRP22888 699 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 CXCL12P48061 93 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 PMS2P54278 862 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 ARHGEF7Q14155 803 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 PTPRRQ15256 657 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 TMEM52BQ4KMG9 183 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 SPDYCQ5MJ68 293 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 TSTD2Q5T7W7 516 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 STEAP4Q687X5 459 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 KIAA1324Q6UXG2 1013 aaKnown RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 LYSMD3Q7Z3D4 306 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 CACUL1Q86Y37 369 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 ANKMY2Q8IV38 441 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 PALM2Q8IXS6 379 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 STYXQ8WUJ0 223 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 HMGB4Q8WW32 186 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 GPR63Q9BZJ6 419 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 KDM4CQ9H3R0 1056 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 TREX1Q9NSU2 369 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 USP36Q9P275 1121 aaKnown RBP15.87■□□□□ 0.13
TMEM53-204ENST00000372243 SERGEFQ9UGK8 458 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 EBF1Q9UH73 591 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 ARL5AQ9Y689 179 aa15.87■□□□□ 0.13
TMEM53-204ENST00000372243 PLK4O00444 970 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 AURKAO14965 403 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 TSPAN6O43657 245 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 PLRG1O43660 514 aaKnown RBP15.86■□□□□ 0.13
TMEM53-204ENST00000372243 SPAG6O75602 509 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 H2AFXP16104 143 aaPredicted RBP15.86■□□□□ 0.13
TMEM53-204ENST00000372243 ZNF140P52738 457 aaPredicted RBP15.86■□□□□ 0.13
TMEM53-204ENST00000372243 TAS2R38P59533 333 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 PTSQ03393 145 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 ACVR1Q04771 509 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 RALGDSQ12967 914 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 SEPT6Q14141 434 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 SKIDA1Q1XH10 827 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 LRRC73Q5JTD7 316 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 SPANXN3Q5MJ09 141 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 HP1BP3Q5SSJ5 553 aaPredicted RBP15.86■□□□□ 0.13
TMEM53-204ENST00000372243 LRRC66Q68CR7 880 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 BMP8AQ7Z5Y6 402 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 TSPAN33Q86UF1 283 aa15.86■□□□□ 0.13
TMEM53-204ENST00000372243 CBARPQ8N350 705 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms