RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ATP5C1P36542 298 aaKnown RBP29■■■□□ 2.23
SSBP3-204ENST00000371320 PRSS55Q6UWB4 352 aaPredicted RBP29■■■□□ 2.23
SSBP3-204ENST00000371320 PGAM4Q8N0Y7 254 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 PELI3Q8N2H9 469 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 OR13C4Q8NGS5 318 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 CDK5RAP1Q96SZ6 601 aaKnown RBP29■■■□□ 2.23
SSBP3-204ENST00000371320 MAGEH1Q9H213 219 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 VCXQ9H320 206 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 VCX3BQ9H321 246 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 MEAF6Q9HAF1 191 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 VPS28Q9UK41 221 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 CFLARO15519 480 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 AOC2O75106 756 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 GALTP07902 379 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 FDXRP22570 491 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 GNA12Q03113 381 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 GALNT1Q10472 559 aaPredicted RBP29■■■□□ 2.23
SSBP3-204ENST00000371320 GPNMBQ14956 572 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 C5orf22Q49AR2 442 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 IL31Q6EBC2 164 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 SH3RF2Q8TEC5 729 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 NACA2Q9H009 215 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 WDR41Q9HAD4 459 aa29■■■□□ 2.23
SSBP3-204ENST00000371320 KCNC1P48547 511 aa28.99■■■□□ 2.23
SSBP3-204ENST00000371320 GSTA3Q16772 222 aa28.99■■■□□ 2.23
SSBP3-204ENST00000371320 ZNF549Q6P9A3 640 aa28.99■■■□□ 2.23
SSBP3-204ENST00000371320 TMEM173Q86WV6 379 aaPredicted RBP28.99■■■□□ 2.23
SSBP3-204ENST00000371320 OR7D4Q8NG98 312 aa28.99■■■□□ 2.23
SSBP3-204ENST00000371320 TTLL2Q9BWV7 592 aa28.99■■■□□ 2.23
SSBP3-204ENST00000371320 GSTO2Q9H4Y5 243 aa28.99■■■□□ 2.23
SSBP3-204ENST00000371320 MTF2Q9Y483 593 aaPredicted RBP28.99■■■□□ 2.23
SSBP3-204ENST00000371320 ACTL7AQ9Y615 435 aa28.99■■■□□ 2.23
SSBP3-204ENST00000371320 TRPA1O75762 1119 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 HOXB8P17481 243 aaPredicted RBP28.98■■■□□ 2.23
SSBP3-204ENST00000371320 HOXD9P28356 352 aaPredicted RBP28.98■■■□□ 2.23
SSBP3-204ENST00000371320 THOP1P52888 689 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 LRRC36Q1X8D7 754 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 PIGGQ5H8A4 983 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 ALG1LQ6GMV1 187 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 OR52K2Q8NGK3 314 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 TRMOQ9BU70 441 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 SPON2Q9BUD6 331 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 CATSPERZQ9NTU4 200 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 DLGAP2Q9P1A6 1054 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 SCOCQ9UIL1 159 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 ZFP37Q9Y6Q3 630 aaPredicted RBP28.98■■■□□ 2.23
SSBP3-204ENST00000371320 TCAF2A6NFQ2 919 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 NDST3O95803 873 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 PENKP01210 267 aaPredicted RBP28.98■■■□□ 2.23
SSBP3-204ENST00000371320 SLC11A2P49281 568 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 C1QTNF8P60827 252 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 ZNF423Q2M1K9 1284 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 CHSY3Q70JA7 882 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 OR4L1Q8NH43 312 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 GDPD5Q8WTR4 605 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 MGME1Q9BQP7 344 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 MRGBPQ9NV56 204 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 SEPT3Q9UH03 358 aa28.98■■■□□ 2.23
SSBP3-204ENST00000371320 MAGEA13PA6NCF6 341 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 H3BNX3 289 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 NOGQ13253 232 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 BFSP2Q13515 415 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 SEMA3AQ14563 771 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 RFTN1Q14699 578 aaPredicted RBP28.97■■■□□ 2.23
SSBP3-204ENST00000371320 LPCAT4Q643R3 524 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 NPAS4Q8IUM7 802 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 SEPT8Q92599 483 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 GATA6Q92908 595 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 PTERQ96BW5 349 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 L3HYPDHQ96EM0 354 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 NR1H4Q96RI1 486 aaPredicted RBP28.97■■■□□ 2.23
SSBP3-204ENST00000371320 KLHL4Q9C0H6 718 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 RIMKLBQ9ULI2 386 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 TRAF6Q9Y4K3 522 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 GREB1Q4ZG55 1949 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 SMIM24O75264 130 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 SUPT7LO94864 414 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 HSPA1AP0DMV8 641 aaKnown RBP28.97■■■□□ 2.23
SSBP3-204ENST00000371320 HSPA1BP0DMV9 641 aaKnown RBP28.97■■■□□ 2.23
SSBP3-204ENST00000371320 PMLP29590 882 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 PKNOX1P55347 436 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 ZNF678Q5SXM1 525 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 PDSS2Q86YH6 399 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 ZNF512Q96ME7 567 aaPredicted RBP28.97■■■□□ 2.23
SSBP3-204ENST00000371320 TRIB3Q96RU7 358 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 NPAS2Q99743 824 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 TMEM175Q9BSA9 504 aa28.97■■■□□ 2.23
SSBP3-204ENST00000371320 CINPQ9BW66 212 aaPredicted RBP28.97■■■□□ 2.23
SSBP3-204ENST00000371320 TBKBP1A7MCY6 615 aa28.96■■■□□ 2.23
SSBP3-204ENST00000371320 INHAP05111 366 aa28.96■■■□□ 2.23
SSBP3-204ENST00000371320 CD1DP15813 335 aa28.96■■■□□ 2.23
SSBP3-204ENST00000371320 CDH4P55283 916 aa28.96■■■□□ 2.23
SSBP3-204ENST00000371320 RYBPQ8N488 228 aaPredicted RBP28.96■■■□□ 2.23
SSBP3-204ENST00000371320 FBXO22Q8NEZ5 403 aa28.96■■■□□ 2.23
SSBP3-204ENST00000371320 PXYLP1Q8TE99 480 aa28.96■■■□□ 2.23
SSBP3-204ENST00000371320 USP13Q92995 863 aaPredicted RBP28.96■■■□□ 2.23
SSBP3-204ENST00000371320 MRPL9Q9BYD2 267 aaKnown RBP28.96■■■□□ 2.23
SSBP3-204ENST00000371320 UBA2Q9UBT2 640 aaPredicted RBP28.96■■■□□ 2.23
SSBP3-204ENST00000371320 UBDO15205 165 aa28.95■■■□□ 2.23
SSBP3-204ENST00000371320 LINGO3P0C6S8 592 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms