RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CELF3Q5SZQ8 465 aaKnown RBP15.96■□□□□ 0.14
COL17A1-202ENST00000369733 NEK10Q6ZWH5 1172 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 RALGPS2Q86X27 583 aaPredicted RBP15.96■□□□□ 0.14
COL17A1-202ENST00000369733 ENDOVQ8N8Q3 282 aaKnown RBP15.96■□□□□ 0.14
COL17A1-202ENST00000369733 PHF12Q96QT6 1004 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 OR52E6Q96RD3 313 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 MRIQ9BWK5 157 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 CLDN25C9JDP6 229 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 CCNE2O96020 404 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 YWHAQP27348 245 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 GTF2A2P52657 109 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 MAXP61244 160 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 LIPEQ05469 1076 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 MTA1Q13330 715 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 USP39Q53GS9 565 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 GALNT5Q7Z7M9 940 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 ERI1Q8IV48 349 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 NAT8LQ8N9F0 302 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 POP5Q969H6 163 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 MYLPFQ96A32 169 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 TMEM159Q96B96 161 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 MRPL48Q96GC5 212 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 CDK5RAP1Q96SZ6 601 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 TOR4AQ9NXH8 423 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 WNT10BO00744 389 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 GPIP06744 558 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 PRKCQQ04759 706 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 SHROOM1Q2M3G4 852 aaPredicted RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 SLC9B1Q4ZJI4 515 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 CLEC6AQ6EIG7 209 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 ZCCHC8Q6NZY4 707 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 ZFAND2BQ8WV99 257 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 Q96MT0 163 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 RBM4BQ9BQ04 359 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 RBM4Q9BWF3 364 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 OGDHLQ9ULD0 1010 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 CILPO75339 1184 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 ITGAXP20702 1163 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 TTPAP49638 278 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 POLR2JP52435 117 aaKnown RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 MED22Q15528 200 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF614Q8N883 585 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 REPS1Q96D71 796 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 PGLYRP2Q96PD5 576 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 OSBPL10Q9BXB5 764 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 PLK2Q9NYY3 685 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF221Q9UK13 617 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 IGLV3-22A0A075B6J6 115 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 E7ENX8 843 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 M0R2N6 131 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 IFRD1O00458 451 aaPredicted RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 CLTBP09497 229 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 TEX44Q53QW1 395 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 HECTD2Q5U5R9 776 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 RETSATQ6NUM9 610 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 TWIST2Q8WVJ9 160 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 PPM1MQ96MI6 270 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 RCOR3Q9P2K3 495 aaPredicted RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 AGRPO00253 132 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 BCKDKO14874 412 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 ZBTB14O43829 449 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 GJB1P08034 283 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 UMPSP11172 480 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 HOXA10P31260 410 aaPredicted RBP15.95■□□□□ 0.14
COL17A1-202ENST00000369733 CAPGP40121 348 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 WNT3AP56704 352 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 DLG1Q12959 904 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 TATDN1Q6P1N9 297 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 PLEKHH3Q7Z736 793 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 LRRC49Q8IUZ0 686 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 CAMKK1Q8N5S9 505 aa15.95■□□□□ 0.14
COL17A1-202ENST00000369733 H3BMM5 538 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 TFECO14948 347 aaPredicted RBP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 MFSD3Q96ES6 412 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ITCHQ96J02 903 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 SEMA3CQ99985 751 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 GPATCH1Q9BRR8 931 aaKnown RBP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 TELO2Q9Y4R8 837 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 BTN3A3O00478 584 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 NKRFO15226 690 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 B4GALT4O60513 344 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 AP2A1O95782 977 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 PIRTP0C851 137 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 GRK4P32298 578 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 SLC39A12Q504Y0 691 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 TAMM41Q96BW9 452 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ALG2Q9H553 416 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 APOBEC3GQ9HC16 384 aaKnown RBP15.94■□□□□ 0.14
COL17A1-202ENST00000369733 BCL9LQ86UU0 1499 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 CLDN5O00501 218 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 RGS10O43665 173 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ZFP69Q49AA0 526 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ARMC12Q5T9G4 340 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 PAOXQ6QHF9 649 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 LENG9Q96B70 501 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 ROPN1LQ96C74 230 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 DKK3Q9UBP4 350 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 TRIM17Q9Y577 477 aa15.94■□□□□ 0.14
COL17A1-202ENST00000369733 MDM4O15151 490 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms