RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 IZUMO2Q6UXV1 221 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CHST9Q7L1S5 443 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CAND1Q86VP6 1230 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ZDHHC14Q8IZN3 488 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 FITM2Q8N6M3 262 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 POU5F2Q8N7G0 328 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 OR4K2Q8NGD2 314 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 OR10T2Q8NGX3 314 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 DLG3Q92796 817 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ACDQ96AP0 544 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 TIFAQ96CG3 184 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 SPATA17Q96L03 361 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 C17orf80Q9BSJ5 609 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 IL1RL2Q9HB29 575 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 MRM3Q9HC36 420 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ANLNQ9NQW6 1124 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 INTS10Q9NVR2 710 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 LNPEPQ9UIQ6 1025 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 AP3M1Q9Y2T2 418 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 KPNA3O00505 521 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 RGS14O43566 566 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 SYNCRIPO60506 623 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 EPOP01588 193 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CATP04040 527 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 FCGR1AP12314 374 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 COX4I1P13073 169 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 RPL17P18621 184 aaKnown RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CDH2P19022 906 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CACNG1Q06432 222 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 TAF1AQ15573 450 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 XKR4Q5GH76 650 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 MS4A13Q5J8X5 152 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 PPM1JQ5JR12 505 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 RALGPS1Q5JS13 557 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 GPR158Q5T848 1215 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 LRRC74BQ6ZQY2 392 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ARHGAP22Q7Z5H3 698 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 DNAJB7Q7Z6W7 309 aaPredicted RBP5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 UMODL1-AS1Q8N2C9 162 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 LEMD2Q8NC56 503 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 RFWD2Q8NHY2 731 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ATL1Q8WXF7 558 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 DPF3Q92784 378 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 TBATAQ96M53 351 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ACOX2Q99424 681 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 COPS8Q99627 209 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 OMDQ99983 421 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 HTATIP2Q9BUP3 242 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 KIFC1Q9BW19 673 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 ZFYVE1Q9HBF4 777 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 TMEM216Q9P0N5 145 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC12A4Q9UP95 1085 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 DYRK1BQ9Y463 629 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 DTNAQ9Y4J8 743 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 CPQQ9Y646 472 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 SSC5DA1L4H1 1573 aa5.33□□□□□ -1.56
SMNDC1-202ENST00000369603 AZIN1O14977 448 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 LYPLA1O75608 230 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PAPSS2O95340 614 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TBX18O95935 607 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ADH1CP00326 375 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SOD2P04179 222 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ITGB6P18564 788 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MPP1Q00013 466 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CRY1Q16526 586 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TAZQ16635 292 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 FNDC5Q8NAU1 212 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 OR52K2Q8NGK3 314 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SUSD6Q92537 303 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 NXNL1Q96CM4 212 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 RMDN2Q96LZ7 410 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 RHBDL2Q9NX52 303 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PRPF19Q9UMS4 504 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 NR2E3Q9Y5X4 410 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ARFGEF1Q9Y6D6 1849 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TCRBV5S1A1TA0A578 114 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 MEIS3P2A8K0S8 358 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 CXorf49A8MYA2 514 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 LIN7AO14910 233 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 NPHS1O60500 1241 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 GUCA1CO95843 209 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ITGBL1O95965 494 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 FTH1P02794 183 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 RPN2P04844 631 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 PTPN2P17706 415 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 HALP42357 657 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 GAD2Q05329 585 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 TRIM32Q13049 653 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SERINC3Q13530 473 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 BOP1Q14137 746 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 STARD3Q14849 445 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ACOX1Q15067 660 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 FNDC3BQ53EP0 1204 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 SETMARQ53H47 684 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 FBXL19Q6PCT2 694 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 COLGALT2Q8IYK4 626 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ARFGAP1Q8N6T3 406 aa5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 ARL14EPQ8N8R7 260 aaPredicted RBP5.32□□□□□ -1.56
SMNDC1-202ENST00000369603 KREMEN2Q8NCW0 462 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms