RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 UXTQ9UBK9 157 aaPredicted RBP8.9□□□□□ -0.98
TPM3-213ENST00000368545 SLC12A6Q9UHW9 1150 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 YIPF1Q9Y548 306 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 ZFHX2Q9C0A1 2572 aaPredicted RBP8.9□□□□□ -0.98
TPM3-213ENST00000368545 CLUHO75153 1309 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 OBSL1O75147 1896 aa8.9□□□□□ -0.98
TPM3-213ENST00000368545 GOLGA6L10A6NI86 522 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 KCNU1A8MYU2 1149 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 MSI1O43347 362 aaKnown RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 NUDT17P0C025 328 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 ETS1P14921 441 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 RBL1P28749 1068 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 EPHB2P29323 1055 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 RPL22P35268 128 aaKnown RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 TUBP50607 506 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 SLC10A2Q12908 348 aaPredicted RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 UAP1Q16222 522 aaPredicted RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 TAF12Q16514 161 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 KCTD19Q17RG1 926 aaPredicted RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 C10orf120Q5SQS8 335 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 MANEALQ5VSG8 457 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 DENND2CQ68D51 928 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 KLHDC10Q6PID8 442 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 PPP1R21Q6ZMI0 780 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 SRLQ86TD4 932 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 PAF1Q8N7H5 531 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 ATP6V0D2Q8N8Y2 350 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 FBXW5Q969U6 566 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 FCRL2Q96LA5 508 aaPredicted RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 MYRFLQ96LU7 910 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 PSMG3-AS1Q96PY0 264 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 SH3GL2Q99962 352 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 FRMD8Q9BZ67 464 aaPredicted RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 MAGEB5Q9BZ81 275 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 TBC1D17Q9HA65 648 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 RXFP1Q9HBX9 757 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 ETNK2Q9NVF9 386 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 MARCH2Q9P0N8 246 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 PPARGC1AQ9UBK2 798 aaKnown RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 MAGED2Q9UNF1 606 aaPredicted RBP8.9□□□□□ -0.99
TPM3-213ENST00000368545 DMTF1Q9Y222 760 aa8.9□□□□□ -0.99
TPM3-213ENST00000368545 ANAPC1Q9H1A4 1944 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 C5orf60A6NFR6 353 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 GOLGA8KD6RF30 607 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 FAM72CH0Y354 149 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 AGPSO00116 658 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 PRRG1O14668 218 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 CHADO15335 359 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 MTSS1O43312 755 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 TLR5O60602 858 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 SEC24AO95486 1093 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 RHCEP18577 417 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 OAS2P29728 719 aaKnown RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 HALP42357 657 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 FAM193AP78312 1265 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 BASP1P80723 227 aaKnown RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 RHDQ02161 417 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 ZNF33AQ06730 810 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 EFEMP1Q12805 493 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 PRKD1Q15139 912 aaPredicted RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 RNFT1Q5M7Z0 435 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 FAM72AQ5TYM5 149 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 NUGGCQ68CJ6 796 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 FAM72DQ6L9T8 149 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 CROCCP2Q86T23 111 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 PRUNE1Q86TP1 453 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 ITIH5Q86UX2 942 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 CCDC25Q86WR0 208 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 FAM72BQ86X60 149 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 DTWD1Q8N5C7 304 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 LZTR1Q8N653 840 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 HTR3CQ8WXA8 447 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 CPT1BQ92523 772 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 PRCCQ92733 491 aaPredicted RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 BTN2A3PQ96KV6 586 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 KLC2Q9H0B6 622 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 DLGAP2Q9P1A6 1054 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 HBS1LQ9Y450 684 aaKnown RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 EIF3HO15372 352 aaKnown RBP eCLIP8.89□□□□□ -0.99
TPM3-213ENST00000368545 GCATO75600 419 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 SYF2O95926 243 aaKnown RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 IGLV3-27P01718 113 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 NTRK1P04629 796 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 RAB6AP20340 208 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 CHKAP35790 457 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 ATP5C1P36542 298 aaKnown RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 EPHB3P54753 998 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 STARD6P59095 220 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 COG7P83436 770 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 N4BP2L1Q5TBK1 243 aaPredicted RBP8.89□□□□□ -0.99
TPM3-213ENST00000368545 CENPUQ71F23 418 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 RASSF3Q86WH2 238 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 DCLK2Q8N568 766 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 NAT8LQ8N9F0 302 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 GALNT6Q8NCL4 622 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 EDARADDQ8WWZ3 215 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 ACDQ96AP0 544 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 HDAC11Q96DB2 347 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 LOXL4Q96JB6 756 aa8.89□□□□□ -0.99
TPM3-213ENST00000368545 ZNF512Q96ME7 567 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms