RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 LRP6O75581 1613 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 RGSL1A5PLK6 1076 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 C5orf60A6NFR6 353 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ZBTB14O43829 449 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 XYLBO75191 536 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 EPHA3P29320 983 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 GRK3P35626 688 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 NEK3P51956 506 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 UBAP2LQ14157 1087 aaKnown RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ARMC6Q6NXE6 501 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 SLC24A5Q71RS6 500 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 ALYREFQ86V81 257 aaKnown RBP13.31□□□□□ -0.28
PTPRK-204ENST00000368210 OR52K2Q8NGK3 314 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 SERAC1Q96JX3 654 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 MARK4Q96L34 752 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 RHOBTB2Q9BYZ6 727 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 POLR1BQ9H9Y6 1135 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 LGALS13Q9UHV8 139 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 VWA7Q9Y334 891 aa13.31□□□□□ -0.28
PTPRK-204ENST00000368210 SCN11AQ9UI33 1791 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 A0A1W2PQH9 124 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 CARNS1A5YM72 827 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 RGS14O43566 566 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ABCB1P08183 1280 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 CYP2A6P11509 494 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 CRHR1P34998 444 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 GPD2P43304 727 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 TAF10Q12962 218 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ANO7Q6IWH7 933 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 TMEM192Q8IY95 271 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 RTL3Q8N8U3 475 aaKnown RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 SPG21Q9NZD8 308 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 IFRD1O00458 451 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PCDH8O95206 1070 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ZBTB11O95625 1053 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ASLP04424 464 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ASGR1P07306 291 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 POU5F1Q01860 360 aaKnown RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ISLR2Q6UXK2 745 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 OOSP2Q86WS3 158 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PHACTR4Q8IZ21 702 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PYROXD2Q8N2H3 581 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ZNF557Q8N988 423 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 BTN2A3PQ96KV6 586 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ZNF570Q96NI8 536 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 COPS7BQ9H9Q2 264 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 MIEF1Q9NQG6 463 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 H2AFY2Q9P0M6 372 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 EPN2O95208 641 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 LPOP22079 712 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 OR1D2P34982 312 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ARL4DP49703 201 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 SNRPD1P62314 119 aaKnown RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 DUSP4Q13115 394 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 C11orf91Q3C1V1 193 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ZDHHC24Q6UX98 284 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 DLK2Q6UY11 383 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ATG16L2Q8NAA4 619 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PSMA8Q8TAA3 256 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PCDH19Q8TAB3 1148 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PCED1BQ96HM7 432 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 RNF145Q96MT1 663 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 C9orf16Q9BUW7 83 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 A0A1W2PQ72 361 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 TSPAN4O14817 238 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 TBL1XO60907 577 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PEX11AO75192 247 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ELNP15502 786 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 TYMPP19971 482 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 LMO2P25791 158 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 HSPA14Q0VDF9 509 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 ARHGAP17Q68EM7 881 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 MINDY2Q8NBR6 621 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PDPRQ8NCN5 879 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 BPIFA1Q9NP55 256 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 AGO1Q9UL18 857 aaKnown RBP13.3□□□□□ -0.28
PTPRK-204ENST00000368210 PDE4DIPQ5VU43 2346 aa13.3□□□□□ -0.28
PTPRK-204ENST00000368210 SIN3BO75182 1162 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 GCATO75600 419 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 LRIG2O94898 1065 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 IFNA14P01570 189 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 SNRPB2P08579 225 aaKnown RBP13.29□□□□□ -0.28
PTPRK-204ENST00000368210 HNRNPLP14866 589 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■□□ 17.5
PTPRK-204ENST00000368210 TSPAN8P19075 237 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 SLC5A3P53794 718 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ACOX1Q15067 660 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 DEFB115Q30KQ5 88 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 GPR107Q5VW38 600 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 SLC39A4Q6P5W5 647 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 OTOP3Q7RTS5 596 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 FBXW8Q8N3Y1 598 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 IRGQQ8WZA9 623 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 TAMM41Q96BW9 452 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 OSBPL11Q9BXB4 747 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 PNPOQ9NVS9 261 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms