RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
TPR-201ENST00000367478 CHSY3Q70JA7 882 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ATG9AQ7Z3C6 839 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 SAPCD2Q86UD0 394 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 FCGR1BQ92637 280 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 ALG9Q9H6U8 611 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 MTRRQ9UBK8 725 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 MKLN1Q9UL63 735 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 TMEM5Q9Y2B1 443 aa12.47□□□□□ -0.41
TPR-201ENST00000367478 TMEM94Q12767 1356 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 UMODL1Q5DID0 1318 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 RPTORQ8N122 1335 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 PEPDP12955 493 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 HTR1BP28222 390 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 FOXO4P98177 505 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 FAAP100Q0VG06 881 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 DIRAS2Q96HU8 199 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 AMD1P17707 334 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 LSM3P62310 102 aaKnown RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 ZNF730Q6ZMV8 503 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 ADCY4Q8NFM4 1077 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 SPATA9Q9BWV2 254 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 SEMA4BQ9NPR2 832 aaPredicted RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 PPEF2O14830 753 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 SLC22A3O75751 556 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 MICAL2O94851 1124 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 CEBPGP53567 150 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 LARS2Q15031 903 aaKnown RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 FRMD7Q6ZUT3 714 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 C4orf19Q8IY42 314 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 ZNF606Q8WXB4 792 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 MTFMTQ96DP5 389 aaKnown RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 RSPH9Q9H1X1 276 aaPredicted RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 TSPAN4O14817 238 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 SLC6A3Q01959 620 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 GIT2Q14161 759 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 TMEM17Q86X19 198 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 AP4B1Q9Y6B7 739 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 DRG2P55039 364 aaKnown RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 TFAP2DQ7Z6R9 452 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 KLHL5Q96PQ7 755 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 PRRG4Q9BZD6 226 aa12.46□□□□□ -0.41
TPR-201ENST00000367478 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
TPR-201ENST00000367478 FADS2P1A8MWK0 482 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 PDCD5O14737 125 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 POMCP01189 267 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 HGFP14210 728 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 HOXC12P31275 282 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 SLC7A2P52569 658 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 TTMPQ5BVD1 217 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 ZNF410Q86VK4 478 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 HACL1Q9UJ83 578 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 SERPINA3P01011 423 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 WEE1P30291 646 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 TIE1P35590 1138 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 CCL15Q16663 113 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 OR2L3Q8NG85 312 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 SUSD6Q92537 303 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 NEUROD4Q9HD90 331 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 MANFP55145 182 aaKnown RBP12.46□□□□□ -0.42
TPR-201ENST00000367478 XKR6Q5GH73 641 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 SLC9A4Q6AI14 798 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 SPATA20Q8TB22 786 aa12.46□□□□□ -0.42
TPR-201ENST00000367478 NAGLUP54802 743 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 ZDHHC20Q5W0Z9 365 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 AGAP11Q8TF27 550 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 TMEM168Q9H0V1 697 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 XKR8Q9H6D3 395 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 RCOR3Q9P2K3 495 aaPredicted RBP12.45□□□□□ -0.42
TPR-201ENST00000367478 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 DDX3YO15523 660 aaKnown RBP12.45□□□□□ -0.42
TPR-201ENST00000367478 TPD52L2O43399 206 aaKnown RBP12.45□□□□□ -0.42
TPR-201ENST00000367478 ARCN1P48444 511 aaKnown RBP12.45□□□□□ -0.42
TPR-201ENST00000367478 CDKL1Q00532 357 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 ZZZ3Q8IYH5 903 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
TPR-201ENST00000367478 TSEN15Q8WW01 171 aaKnown RBP12.45□□□□□ -0.42
TPR-201ENST00000367478 ABCG2Q9UNQ0 655 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 CD2P06729 351 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 NOS2P35228 1153 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 TUBA1BP68363 451 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 TUBA1AQ71U36 451 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 PQLC1Q8N2U9 271 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 ZNF563Q8TA94 476 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 CXorf40AQ8TE69 158 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 MKL1Q969V6 931 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 ETNK2Q9NVF9 386 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 HNF4AP41235 474 aa12.45□□□□□ -0.42
TPR-201ENST00000367478 MARSP56192 900 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms