RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ACRBPQ8NEB7 543 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 TTC9Q92623 222 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 CENPIQ92674 756 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 MED8Q96G25 268 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 WDR92Q96MX6 357 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 CCNL2Q96S94 520 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 SYT11Q9BT88 431 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 TCEAL2Q9H3H9 227 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 DEF6Q9H4E7 631 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 SEPT11Q9NVA2 429 aaKnown RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 SEPT10Q9P0V9 454 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 SIRPGQ9P1W8 387 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 UBA2Q9UBT2 640 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 ATXN7L1Q9ULK2 861 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-209ENST00000366735 GPR34Q9UPC5 381 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 NEU3Q9UQ49 428 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 PCDHGA7Q9Y5G6 932 aa12.5□□□□□ -0.41
MRPL55-209ENST00000366735 B8ZZF3 427 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 RASA4BC9J798 803 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 FAM72CH0Y354 149 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 ZW10O43264 779 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 RASA4O43374 803 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 CREB3O43889 395 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 TNFP01375 233 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 RPLP0P05388 317 aaKnown RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 JMJD7P0C870 316 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 KELP23276 732 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 CCKBRP32239 447 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 ARHGAP25P42331 645 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 PDX1P52945 283 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 ETF1P62495 437 aaKnown RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 CLN3Q13286 438 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 MTM1Q13496 603 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 SERINC3Q13530 473 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 SLC18A3Q16572 532 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 FAM72AQ5TYM5 149 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 FAM72DQ6L9T8 149 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 PPP1R2P3Q6NXS1 205 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 DNAJC24Q6P3W2 148 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 SCYL2Q6P3W7 929 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 XKR5Q6UX68 686 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 RAB11FIP2Q7L804 512 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 ZNF571Q7Z3V5 609 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 FAM72BQ86X60 149 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 JOSD2Q8TAC2 188 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 SLC30A5Q8TAD4 765 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 CCDC74AQ96AQ1 378 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 HMCESQ96FZ2 354 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 PRR11Q96HE9 360 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 C16orf45Q96MC5 204 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 ZNF641Q96N77 438 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 TUBGCP5Q96RT8 1024 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 CLPBQ9H078 707 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 HAUS4Q9H6D7 363 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 ATP13A3Q9H7F0 1226 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 CAAP1Q9H8G2 361 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 MBNL1Q9NR56 388 aaKnown RBP12.49□□□□□ -0.41
MRPL55-209ENST00000366735 NENFQ9UMX5 172 aa12.49□□□□□ -0.41
MRPL55-209ENST00000366735 TSPAN11A1L157 253 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 WASH4PA8MWX3 477 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 CACNB4O00305 520 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-209ENST00000366735 PJA2O43164 708 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 PIGNO95427 931 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 GJB6O95452 261 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 PCCBP05166 539 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 TNNT1P13805 278 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 TIMP2P16035 220 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 NFKBIAP25963 317 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 SERPINA4P29622 427 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 VAV2P52735 878 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 TPI1P60174 286 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 SRP54P61011 504 aaKnown RBP12.48□□□□□ -0.41
MRPL55-209ENST00000366735 LY6DQ14210 128 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 AGERQ15109 404 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 UGP2Q16851 508 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 ALG11Q2TAA5 492 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 RD3Q7Z3Z2 195 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 PHLDB2Q86SQ0 1253 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 PHF13Q86YI8 300 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-209ENST00000366735 ZSCAN1Q8NBB4 408 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 EXOC2Q96KP1 924 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 APOOQ9BUR5 198 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 SUV39H2Q9H5I1 410 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 AKAP7Q9P0M2 348 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-209ENST00000366735 MYO1AQ9UBC5 1043 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 ATP8A1Q9Y2Q0 1164 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
MRPL55-209ENST00000366735 HEMK1Q9Y5R4 338 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-209ENST00000366735 ZNF462Q96JM2 2506 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 A0A087X0T9 212 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 A0A1W2PNU3 283 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 ARHGAP42A6NI28 874 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 SIGLEC16A6NMB1 481 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 SLC28A2O43868 658 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms