RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MKRN2Q9H000 416 aaKnown RBP11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 NACA2Q9H009 215 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 EIF2B3Q9NR50 452 aaKnown RBP11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 VANGL2Q9ULK5 521 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 ANKRD6Q9Y2G4 727 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 SH3BP1Q9Y3L3 701 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 PCDHGA1Q9Y5H4 931 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 LRRK2Q5S007 2527 aa11.37□□□□□ -0.59
CSNK1E-202ENST00000366216 BSNQ9UPA5 3926 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 TLN1Q9Y490 2541 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 HMGB1P1B2RPK0 211 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 CBX4O00257 560 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 SLC28A2O43868 658 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 CACNG3O60359 315 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 BRINP1O60477 761 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 ACSL4O60488 711 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 RFPL3O75679 317 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 LATS1O95835 1130 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 IGLV3-19P01714 112 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 SHBGP04278 402 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 HMBSP08397 361 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 C1SP09871 688 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 CDK4P11802 303 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 PTPN3P26045 913 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 SLC11A2P49281 568 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 HARS2P49590 506 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 CSRP3P50461 194 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 SARNPP82979 210 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 CBX1P83916 185 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 FOXK1P85037 733 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 PDIA2Q13087 525 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 LY6DQ14210 128 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 STARD3Q14849 445 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 TEAD4Q15561 434 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 KYNUQ16719 465 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 TEX44Q53QW1 395 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 TTMPQ5BVD1 217 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 FNBP1LQ5T0N5 605 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 RAP1GAP2Q684P5 730 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 TIGD7Q6NT04 549 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 FBXL22Q6P050 247 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 LAYNQ6UX15 382 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 ZNF567Q8N184 647 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 OR2W6PQ8NHA6 318 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 SNX19Q92543 992 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 ARL8AQ96BM9 186 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 LRRC39Q96DD0 335 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 ATP6V1G3Q96LB4 118 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 C9orf72Q96LT7 481 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 SLC39A8Q9C0K1 460 aa11.36□□□□□ -0.59
CSNK1E-202ENST00000366216 NBASA2RRP1 2371 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 NBPF19A0A087WUL8 3843 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 GOLGA6CA6NDK9 693 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 NEDD8-MDP1E9PL57 170 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 F5H5T6 163 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 GOLGA8MH3BSY2 632 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 MAFKO60675 156 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 STC2O76061 302 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 ACSL3O95573 720 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 NTRK1P04629 796 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 APRTP07741 180 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 GOLGA6DP0CG33 693 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 MLNP12872 115 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 TYRP14679 529 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 TACR2P21452 398 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 MAGEA3P43357 314 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 GRIA4P48058 902 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 MAPKAPK2P49137 400 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 TMPRSS3P57727 454 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 IFI35P80217 286 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 IL9RQ01113 521 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 STAT4Q14765 748 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 KRT71Q3SY84 523 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 DNAJC21Q5F1R6 531 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 UBAP2Q5T6F2 1119 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 HES3Q5TGS1 186 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 ITPRIPL1Q6GPH6 555 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 NADSYN1Q6IA69 706 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 PID1Q7Z2X4 250 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 CHSY1Q86X52 802 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 KLHDC8BQ8IXV7 354 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 ZBED8Q8IZ13 594 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 ATPAF2Q8N5M1 289 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 NETO2Q8NC67 525 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 PYROXD1Q8WU10 500 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 PGM2Q96G03 612 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 CELF6Q96J87 481 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 SERPINB12Q96P63 405 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 XPO6Q96QU8 1125 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 DDX50Q9BQ39 737 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 CCDC77Q9BR77 488 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 BBS2Q9BXC9 721 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 PCED1AQ9H1Q7 454 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 PPCSQ9HAB8 311 aa11.35□□□□□ -0.59
CSNK1E-202ENST00000366216 XAB2Q9HCS7 855 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms