RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SGO1Q5FBB7 561 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 TXNDC8Q6A555 127 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 ANKRD54Q6NXT1 300 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 FBXO46Q6PJ61 603 aaPredicted RBP4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 LCTLQ6UWM7 567 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 CCNI2Q6ZMN8 369 aaPredicted RBP4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 USP43Q70EL4 1123 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 LINGO2Q7L985 606 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 SFR1Q86XK3 245 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 ZNF354CQ86Y25 554 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 MUC20Q8N307 709 aaPredicted RBP4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 FIG4Q92562 907 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 NR4A3Q92570 626 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 RND1Q92730 232 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 USP13Q92995 863 aaPredicted RBP4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 CD101Q93033 1021 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 KIF1BPQ96EK5 621 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 TMEM19Q96HH6 336 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 APOPT1Q96IL0 206 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 NODALQ96S42 347 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 HAUS8Q9BT25 410 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 ESRP2Q9H6T0 727 aaKnown RBP4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 UBTD1Q9HAC8 227 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 MKKSQ9NPJ1 570 aaPredicted RBP4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 LUZP4Q9P127 313 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 MDFICQ9P1T7 246 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 KCNS2Q9ULS6 477 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 STON1Q9Y6Q2 735 aa4.09□□□□□ -1.75
RNU6-553P-201ENST00000364047 A0A0B4J293 547 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 A0A0G2JPF8 293 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 RRN3P2A6NIE6 340 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 HNRNPCL3B7ZW38 293 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 BMPR1BO00238 502 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 TSPAN4O14817 238 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 MID1O15344 667 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 HNRNPCL1O60812 293 aaKnown RBP4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 RFPL2O75678 378 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 CYC1P08574 325 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 HNRNPCL4P0DMR1 293 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 G6PDP11413 515 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 SHMT1P34896 483 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 MAPK9P45984 424 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 CTF1Q16619 201 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 EIF2S3LQ2VIR3 472 aaKnown RBP4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 DSTYKQ6XUX3 929 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC36A4Q6YBV0 504 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 KRBA2Q6ZNG9 492 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 C9orf139Q6ZV77 190 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 ZNF771Q7L3S4 317 aaPredicted RBP4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 ZBTB2Q8N680 514 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 SPATA22Q8NHS9 363 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 HVCN1Q96D96 273 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 FEM1CQ96JP0 617 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 KLHL15Q96M94 604 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 EPYCQ99645 322 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 EBF2Q9HAK2 575 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 PPP1R14DQ9NXH3 145 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 GGA3Q9NZ52 723 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 C1RLQ9NZP8 487 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 TINAGQ9UJW2 476 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 FBXO9Q9UK97 447 aaPredicted RBP4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 PSAT1Q9Y617 370 aa4.08□□□□□ -1.76
RNU6-553P-201ENST00000364047 TMEM202A6NGA9 273 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 IFNL4K9M1U5 179 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 TROAPQ12815 778 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 TAOK1Q7L7X3 1001 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 CPXCR1Q8N123 301 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 MAB21L3Q8N8X9 362 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 LMNTD1Q8N9Z9 388 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 KCNH5Q8NCM2 988 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 MYRIPQ8NFW9 859 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 KLHL29Q96CT2 875 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 H2AFJQ9BTM1 129 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 VEZTQ9HBM0 779 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 LRRC4Q9HBW1 653 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 GPR108Q9NPR9 543 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 SAGE1Q9NXZ1 904 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 MPP6Q9NZW5 540 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 A4GNTQ9UNA3 340 aa4.07□□□□□ -1.76
RNU6-553P-201ENST00000364047 ZNF587BE7ETH6 402 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 NCAM2O15394 837 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 HOXC11O43248 304 aaPredicted RBP4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 XPNPEP2O43895 674 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 LMX1BO60663 402 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 PAFAH1B1P43034 410 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 GABRB2P47870 512 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 ZNF132P52740 706 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 RAD23BP54727 409 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 SORDQ00796 357 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 ARL16Q0P5N6 197 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 FOXD4Q12950 439 aaPredicted RBP4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 ZRSR2Q15696 482 aaKnown RBP4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC9B1Q4ZJI4 515 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC45A4Q5BKX6 768 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 STPG1Q5TH74 334 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 GDPD4Q6W3E5 623 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 SATL1Q86VE3 508 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 FOXRED2Q8IWF2 684 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 ODF3L1Q8IXM7 274 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms