RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SCAPQ12770 1279 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 TIGD5Q53EQ6 642 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 CASP10Q92851 521 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 VPS33AQ96AX1 596 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 PABPC5Q96DU9 382 aaKnown RBP10.62□□□□□ -0.71
SMC3-201ENST00000361804 FCRL2Q96LA5 508 aaPredicted RBP10.62□□□□□ -0.71
SMC3-201ENST00000361804 MRPL57Q9BQC6 102 aaKnown RBP10.62□□□□□ -0.71
SMC3-201ENST00000361804 EPB41L1Q9H4G0 881 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 GSTO2Q9H4Y5 243 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 SLAMF8Q9P0V8 285 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 TRIOO75962 3097 aa10.62□□□□□ -0.71
SMC3-201ENST00000361804 ITGB1P05556 798 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 SNRPB2P08579 225 aaKnown RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 CAPN3P20807 821 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 CD86P42081 329 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 ENTPD1P49961 510 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 NR1H2P55055 460 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 DSC2Q02487 901 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 CARM1Q86X55 608 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 CLVS1Q8IUQ0 354 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 C2CD4AQ8NCU7 369 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 RDH11Q8TC12 318 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 ERLEC1Q96DZ1 483 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 ZNF597Q96LX8 424 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 PKMYT1Q99640 499 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 AKTIPQ9H8T0 292 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 SPAG4Q9NPE6 437 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 MAP10Q9P2G4 905 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 VPS28Q9UK41 221 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 GBF1Q92538 1859 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 NCF1BA6NI72 391 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 NCF1CA8MVU1 366 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 DLGAP1O14490 977 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 B4GAT1O43505 415 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 NRP2O60462 931 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 KPNA6O60684 536 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 MYL3P08590 195 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 LINC00032P0C843 101 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 HAPLN1P10915 354 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 NCF1P14598 390 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 KCNE1P15382 129 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 RABL3Q5HYI8 236 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 TOP6BLQ8N6T0 577 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 HDAC10Q969S8 669 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 TEX37Q96LM6 180 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 PPP1R10Q96QC0 940 aaKnown RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 HBEGFQ99075 208 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 LTB4R2Q9NPC1 389 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 TIMM22Q9Y584 194 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 SCN5AQ14524 2016 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 UBXN8O00124 270 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 H6PDO95479 791 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 SLC10A7Q0GE19 358 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 FAM110CQ1W6H9 321 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 AAK1Q2M2I8 961 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 HECTD2Q5U5R9 776 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 PIWIL4Q7Z3Z4 852 aaKnown RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 SETD3Q86TU7 594 aaPredicted RBP10.61□□□□□ -0.71
SMC3-201ENST00000361804 DDIASQ8IXT1 998 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 DNAJB14Q8TBM8 379 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 ARHGAP39Q9C0H5 1083 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 TREX1Q9NSU2 369 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 CD300AQ9UGN4 299 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 MID2Q9UJV3 735 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 CROTQ9UKG9 612 aa10.61□□□□□ -0.71
SMC3-201ENST00000361804 TRPC5OSA6NMA1 111 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 ERI2A8K979 691 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 H3BNH8 94 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 MGEA5O60502 916 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 C8BP07358 591 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 ADRA1AP35348 466 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PNPLA4P41247 253 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 DIO3P55073 304 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TRIM32Q13049 653 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PLCL1Q15111 1095 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 OR13J1Q8NGT2 312 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 CYGBQ8WWM9 190 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 DLG3Q92796 817 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 RMND5BQ96G75 393 aaPredicted RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 TMEM74Q96NL1 305 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 CYP2S1Q96SQ9 504 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 CNGB3Q9NQW8 809 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 RSL24D1Q9UHA3 163 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 TET1Q8NFU7 2136 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 NCAM2O15394 837 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 SRP72O76094 671 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 CNTN5O94779 1100 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PRKAA2P54646 552 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 ADARP55265 1226 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 HERC3Q15034 1050 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 UGT3A2Q3SY77 523 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 SMYD5Q6GMV2 418 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PM20D1Q6GTS8 502 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 KLHL35Q6PF15 583 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 DHFR2Q86XF0 187 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 DNAAF2Q9NVR5 837 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 SUCOQ9UBS9 1254 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms