RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 BIRC7Q96CA5 298 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 HSPA12BQ96MM6 686 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 KRT12Q99456 494 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 FICDQ9BVA6 458 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 SLC17A9Q9BYT1 436 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 ZFYVE1Q9HBF4 777 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 RAD18Q9NS91 495 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 SUSD2Q9UGT4 822 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 ZFR2Q9UPR6 939 aaKnown RBP13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 ANKRD36A6QL64 1941 aa13.86□□□□□ -0.19
NSMCE1-201ENST00000361439 CTAGE15A4D2H0 777 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 IGLON5A6NGN9 336 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 PRR5-ARHGAP8B1AHC4 643 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 F5H423 210 aaPredicted RBP13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 PRAMEF26H0Y7S4 382 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 TOR1BO14657 336 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 PPFIA2O75334 1257 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 FSBPO95073 299 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 AGTP01019 485 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 CTAGE8P0CG41 777 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 C6P13671 934 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 GNSP15586 552 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 HMGCLP35914 325 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 ADCY8P40145 1251 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 PPP2CBP62714 309 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 PPP2CAP67775 309 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 PTSQ03393 145 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 TRIP13Q15645 432 aaPredicted RBP13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 CNGA3Q16281 694 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 CDKN3Q16667 212 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 LRRC73Q5JTD7 316 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 FAM182AQ5T1J6 154 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 PEAR1Q5VY43 1037 aaPredicted RBP13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 LRRC66Q68CR7 880 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 DENND5AQ6IQ26 1287 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 CTAGE6Q86UF2 777 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 HOOK3Q86VS8 718 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 SYT12Q8IV01 421 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 CTAGE4Q8IX94 777 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 NRSN1Q8IZ57 195 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 SUMF1Q8NBK3 374 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 MCUQ8NE86 351 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 BRSK1Q8TDC3 778 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 L2HGDHQ9H9P8 463 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 ASIC3Q9UHC3 531 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 GGT7Q9UJ14 662 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 ITM2BQ9Y287 266 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 HS3ST3A1Q9Y663 406 aa13.85□□□□□ -0.19
NSMCE1-201ENST00000361439 NUMA1Q14980 2115 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 C1orf232A0A0U1RR37 186 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 LZTS3O60299 673 aaPredicted RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 MMP20O60882 483 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 EPN2O95208 641 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 LMNAP02545 664 aaKnown RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 PYGLP06737 847 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 RETP07949 1114 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 ALPIP09923 528 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 MLNP12872 115 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 CTPS1P17812 591 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 ITIH2P19823 946 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 HNRNPA2B1P22626 353 aaKnown RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 LHCGRP22888 699 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 AKT2P31751 481 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 PTGER3P43115 390 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 DHPSP49366 369 aaPredicted RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 STC1P52823 247 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 RACK1P63244 317 aaKnown RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 OVGP1Q12889 678 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 KCNJ11Q14654 390 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 TAF1AQ15573 450 aaPredicted RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 GLE1Q53GS7 698 aaKnown RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 FAXCQ5TGI0 409 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 SEL1L3Q68CR1 1132 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 PPP1R21Q6ZMI0 780 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 ZNF765Q7L2R6 523 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 TMC3Q7Z5M5 1100 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 PRUNE1Q86TP1 453 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 IQCHQ86VS3 1027 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 PPIL6Q8IXY8 311 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 MMGT1Q8N4V1 131 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 SLC25A41Q8N5S1 370 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 BBOF1Q8ND07 529 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 C1orf216Q8TAB5 229 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 CEP76Q8TAP6 659 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 DTX3LQ8TDB6 740 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 CPT1BQ92523 772 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 COQ10AQ96MF6 247 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 ORAI3Q9BRQ5 295 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 FRMD8Q9BZ67 464 aaPredicted RBP13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 CASS4Q9NQ75 786 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 PKD2L2Q9NZM6 624 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 PILRBQ9UKJ0 227 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 ZNF711Q9Y462 761 aa13.84□□□□□ -0.19
NSMCE1-201ENST00000361439 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
NSMCE1-201ENST00000361439 PRR23AA6NEV1 266 aa13.83□□□□□ -0.2
NSMCE1-201ENST00000361439 C2orf81A6NN90 581 aa13.83□□□□□ -0.2
NSMCE1-201ENST00000361439 WNT9AO14904 365 aa13.83□□□□□ -0.2
NSMCE1-201ENST00000361439 TTI1O43156 1089 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms