RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 FFAR3O14843 346 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 GPR42O15529 346 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 DNAJC8O75937 253 aaPredicted RBP13.9□□□□□ -0.18
CTR9-201ENST00000361367 PRAMEF1O95521 474 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 LBPP18428 481 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 CXCR2P25025 360 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 PDK4Q16654 411 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 LDB1Q86U70 411 aaPredicted RBP13.9□□□□□ -0.18
CTR9-201ENST00000361367 RAVER1Q8IY67 606 aaKnown RBP13.9□□□□□ -0.18
CTR9-201ENST00000361367 CENPLQ8N0S6 344 aaPredicted RBP13.9□□□□□ -0.18
CTR9-201ENST00000361367 CENPTQ96BT3 561 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 TDP1Q9NUW8 608 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 ERVW-1Q9UQF0 538 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 PCDHB1Q9Y5F3 818 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 KCNE2Q9Y6J6 123 aa13.9□□□□□ -0.18
CTR9-201ENST00000361367 ULK1O75385 1050 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 HCAR3P49019 387 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 SKP1P63208 163 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 PPIDQ08752 370 aaKnown RBP13.9□□□□□ -0.19
CTR9-201ENST00000361367 CYP1B1Q16678 543 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 ESRP1Q6NXG1 681 aaKnown RBP13.9□□□□□ -0.19
CTR9-201ENST00000361367 SYT12Q8IV01 421 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 CDYL2Q8N8U2 506 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 KLHL23Q8NBE8 558 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 RDH11Q8TC12 318 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 PLEKHA8Q96JA3 519 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 MAGED4Q96JG8 741 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 KLHL32Q96NJ5 620 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 WRAP53Q9BUR4 548 aaKnown RBP13.9□□□□□ -0.19
CTR9-201ENST00000361367 CCDC134Q9H6E4 229 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 IL23AQ9NPF7 189 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 HS3ST4Q9Y661 456 aa13.9□□□□□ -0.19
CTR9-201ENST00000361367 ILVBLA1L0T0 632 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 MEI4A8MW99 385 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 MRASO14807 208 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 CXCR3P49682 368 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 GRASPQ7Z6J2 395 aaPredicted RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 SNX32Q86XE0 403 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 DACT3Q96B18 629 aaPredicted RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 VPS50Q96JG6 964 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 TMEM209Q96SK2 561 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 OSBPL1AQ9BXW6 950 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 PIF1Q9H611 641 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 MRPS17Q9Y2R5 130 aaKnown RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 KAT6AQ92794 2004 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 TOGARAM1Q9Y4F4 1720 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 KANSL1LA0AUZ9 987 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 CDH5P33151 784 aaPredicted RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 GABRB2P47870 512 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 NAA20P61599 178 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 TBL3Q12788 808 aaKnown RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 RFTN1Q14699 578 aaPredicted RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 TSTD2Q5T7W7 516 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 HECTD2Q5U5R9 776 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 SNX30Q5VWJ9 437 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 NCBP2-AS2Q69YL0 99 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 KRT78Q8N1N4 520 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 WFIKKN2Q8TEU8 576 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 CYGBQ8WWM9 190 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 DNAJC1Q96KC8 554 aaKnown RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 CROTQ9UKG9 612 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 FAM155BO75949 473 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 METTL18O95568 372 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 TNNI3P19429 210 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 CACNG1Q06432 222 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 DMC1Q14565 340 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 CBX2Q14781 532 aaPredicted RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 LIPMQ5VYY2 423 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 C15orf39Q6ZRI6 1047 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 RIPOR1Q6ZS17 1223 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
CTR9-201ENST00000361367 SLC25A23Q9BV35 468 aa13.89□□□□□ -0.19
CTR9-201ENST00000361367 A0A088AWK7 358 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 CCDC154A6NI56 674 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 PTGESO14684 152 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 PEX11AO75192 247 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 ZNF10P21506 573 aaPredicted RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 PROZP22891 400 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTR9-201ENST00000361367 EEF1DP29692 281 aaKnown RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 S100A3P33764 101 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 SEC13P55735 322 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 KIAA0408Q6ZU52 694 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 TMPRSS6Q8IU80 811 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 BEND7Q8N7W2 519 aaPredicted RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 BRSK1Q8TDC3 778 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 QRFPRQ96P65 431 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 STRA6Q9BX79 667 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 HPS4Q9NQG7 708 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 EIF4E1BA6NMX2 242 aaKnown RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 INPPL1O15357 1258 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 ASLP04424 464 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 HPGDP15428 266 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 CDH13P55290 713 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 FRG1Q14331 258 aaKnown RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 TXNDC11Q6PKC3 985 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 GPRIN3Q6ZVF9 776 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 FCRL5Q96RD9 977 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 BBS4Q96RK4 519 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 HAPLN2Q9GZV7 340 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms