RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 NPHS1O60500 1241 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 GUCA1CO95843 209 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 IL1BP01584 269 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 FGFR1P11362 822 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 S100A3P33764 101 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ILF2Q12905 390 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 STRADAQ7RTN6 431 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 NECAB2Q7Z6G3 386 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 TFAP2DQ7Z6R9 452 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 APOBEC3FQ8IUX4 373 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 MINDY2Q8NBR6 621 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 MRIQ9BWK5 157 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 MYOZ2Q9NPC6 264 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 AP3M1Q9Y2T2 418 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 NALCNQ8IZF0 1738 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 H3BNH8 94 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 BUD23O43709 281 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 GRIN3BO60391 1043 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 CLIC3O95833 236 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF460Q14592 562 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 INTS11Q5TA45 600 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 UGT2A3Q6UWM9 527 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 GATAD2AQ86YP4 633 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 HIPK1Q86Z02 1210 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 OR6J1Q8NGC5 347 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ELOVL6Q9H5J4 265 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 USP29Q9HBJ7 922 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ZDHHC2Q9UIJ5 367 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 NFASCO94856 1347 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 PSMD11O00231 422 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 TBX1O43435 398 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 DHRS4L1P0CG22 281 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 UBA1P22314 1058 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 TM4SF1P30408 202 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 FMO4P31512 558 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF135P52742 658 aaPredicted RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 TBC1D25Q3MII6 688 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 TEX44Q53QW1 395 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 PMF1Q6P1K2 205 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 GPSM1Q86YR5 675 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 YTHDF1Q9BYJ9 559 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 RNF19AQ9NV58 838 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ADGRE2Q9UHX3 823 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 KRT6AP02538 564 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 KRT6BP04259 564 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 KRT6CP48668 564 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 C1orf220Q5T0J3 134 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 FLCNQ8NFG4 579 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 ST13P5Q8NFI4 369 aaPredicted RBP16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 CNTN6Q9UQ52 1028 aa16.01■□□□□ 0.15
CLSTN1-201ENST00000361311 SYNDIG1LA6NDD5 238 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 CEACAM7Q14002 265 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 TGFBIQ15582 683 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 FAM91A1Q658Y4 838 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 ARHGAP17Q68EM7 881 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 ERMP1Q7Z2K6 904 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 CINPQ9BW66 212 aaPredicted RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 MARCH7Q9H992 704 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 RCOR3Q9P2K3 495 aaPredicted RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 TMCC3Q9ULS5 477 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 MYH11P35749 1972 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 NRXN3Q9Y4C0 1643 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 CCDC182A6NF36 153 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 NEMP2A6NFY4 417 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 SORBS2O94875 1100 aaKnown RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 USP17L7P0C7H9 530 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 TP53BP2Q13625 1128 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 SPOUT1Q5T280 376 aaKnown RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 FBXO16Q8IX29 292 aaPredicted RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 PYROXD2Q8N2H3 581 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 REPS2Q8NFH8 660 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 RBM4BQ9BQ04 359 aaKnown RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 RBM4Q9BWF3 364 aaKnown RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 KRT84Q9NSB2 600 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16■□□□□ 0.15
CLSTN1-201ENST00000361311 TMEM233B4DJY2 109 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 LOC110117498-PIK3R3F6TDL0 507 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 RRM2P31350 389 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 CLCN2P51788 898 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 TAS2R39P59534 338 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 CYP4F2P78329 520 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 CYP4F3Q08477 520 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 TRIP4Q15650 581 aaPredicted RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 TTLL9Q3SXZ7 439 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 FAM83AQ86UY5 434 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 CAND1Q86VP6 1230 aaKnown RBP16■□□□□ 0.15
CLSTN1-201ENST00000361311 SUN5Q8TC36 379 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 TWIST2Q8WVJ9 160 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 MYDGFQ969H8 173 aa16■□□□□ 0.15
CLSTN1-201ENST00000361311 BCKDKO14874 412 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 RGS10O43665 173 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 MLYCDO95822 493 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 F7P08709 466 aaPredicted RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 AKAP5P24588 427 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 NMBRP28336 390 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 SOAT1P35610 550 aa15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 MRPS5P82675 430 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-201ENST00000361311 ABHD15Q6UXT9 468 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms