RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PAMP19021 973 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 ADRA1AP35348 466 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 TAS2R39P59534 338 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 MYBPC1Q00872 1141 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 PTK2BQ14289 1009 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 PSMD5Q16401 504 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
UBA3-202ENST00000361055 RTP2Q5QGT7 225 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 BORAQ6PGQ7 559 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 B3GNT6Q6ZMB0 384 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 ANKS3Q6ZW76 656 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 TAS1R1Q7RTX1 841 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 ARHGAP22Q7Z5H3 698 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 SCML4Q8N228 414 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 AFAP1L2Q8N4X5 818 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 LZTR1Q8N653 840 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 OR10T2Q8NGX3 314 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 SPATA22Q8NHS9 363 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 SPPL2BQ8TCT7 592 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 DUS3LQ96G46 650 aaKnown RBP12.46□□□□□ -0.41
UBA3-202ENST00000361055 CELF6Q96J87 481 aaKnown RBP12.46□□□□□ -0.41
UBA3-202ENST00000361055 NPAS2Q99743 824 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 OMDQ99983 421 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 GDF15Q99988 308 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 SLC2A11Q9BYW1 496 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 EML4Q9HC35 981 aaKnown RBP12.46□□□□□ -0.41
UBA3-202ENST00000361055 CSNK1G1Q9HCP0 422 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 SUCOQ9UBS9 1254 aaKnown RBP12.46□□□□□ -0.41
UBA3-202ENST00000361055 TCAF1Q9Y4C2 921 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 PCDHGA7Q9Y5G6 932 aa12.46□□□□□ -0.41
UBA3-202ENST00000361055 LAMA2P24043 3122 aaKnown RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 OR6C75A6NL08 312 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 MATN3O15232 486 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 RNASEH2AO75792 299 aaKnown RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 C8BP07358 591 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 ZNF26P17031 533 aaPredicted RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 ARNTP27540 789 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 HTR7P34969 479 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 CD151P48509 253 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 PGGT1BP53609 377 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 RABGGTBP53611 331 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 MPP1Q00013 466 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 GALNT1Q10472 559 aaPredicted RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 MGAT5BQ3V5L5 792 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 CTXN3Q4LDR2 81 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 RBM44Q6ZP01 1051 aaKnown RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 KIAA0408Q6ZU52 694 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 BEND5Q7L4P6 421 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 DDX53Q86TM3 631 aaKnown RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 RNF148Q8N7C7 305 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 TXNDC5Q8NBS9 432 aaKnown RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 HEXDCQ8WVB3 486 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 EDEM1Q92611 657 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.42
UBA3-202ENST00000361055 HIC2Q96JB3 615 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 ELMO2Q96JJ3 720 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 B3GALT6Q96L58 329 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 KLHL32Q96NJ5 620 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 PKMYT1Q99640 499 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 VN1R3Q9BXE9 311 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 PLXNA4Q9HCM2 1894 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 TREX1Q9NSU2 369 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 RWDD3Q9Y3V2 267 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 AP4S1Q9Y587 144 aa12.46□□□□□ -0.42
UBA3-202ENST00000361055 A0A1B0GVG6 124 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 CCDC78A2IDD5 438 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 LCHNA4D1U4 455 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 SLC12A2P55011 1212 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 RHDQ02161 417 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 LAMB3Q13751 1172 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 LRP8Q14114 963 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 SQLEQ14534 574 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 POU6F1Q14863 301 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 FAM83EQ2M2I3 478 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 NADK2Q4G0N4 442 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 TMEM259Q4ZIN3 620 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 KIAA0930Q6ICG6 404 aaPredicted RBP12.45□□□□□ -0.42
UBA3-202ENST00000361055 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 CNSTQ6PJW8 725 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 RANBP10Q6VN20 620 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 ARHGAP12Q8IWW6 846 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 DCP1BQ8IZD4 617 aaKnown RBP12.45□□□□□ -0.42
UBA3-202ENST00000361055 RIN3Q8TB24 985 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 USP33Q8TEY7 942 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 RNF34Q969K3 372 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 TMA16Q96EY4 203 aaKnown RBP12.45□□□□□ -0.42
UBA3-202ENST00000361055 SMARCD1Q96GM5 515 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 MARK4Q96L34 752 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 CNBD2Q96M20 576 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 TMEM209Q96SK2 561 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 HERC2P3Q9BVR0 1158 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 PRKD2Q9BZL6 878 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 ZCWPW1Q9H0M4 648 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 MEAF6Q9HAF1 191 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 TMEM30AQ9NV96 361 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 ADA2Q9NZK5 511 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 ATXN10Q9UBB4 475 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 FBXO5Q9UKT4 447 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms