RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 KCNA5P22460 613 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 MAGEA12P43365 314 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 RPS24P62847 133 aaKnown RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 COL19A1Q14993 1142 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 FAM78AQ5JUQ0 283 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ALYREFQ86V81 257 aaKnown RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 RSPRY1Q96DX4 576 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 PTCD3Q96EY7 689 aaKnown RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 LRRC3BQ96PB8 259 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ATP13A1Q9HD20 1204 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 NT5MQ9NPB1 228 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 LNPEPQ9UIQ6 1025 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 CCDC22O60826 627 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 PMPCBO75439 489 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 FOSL2P15408 326 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 CDH4P55283 916 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 WNT3AP56704 352 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 SLC10A7Q0GE19 358 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 HSP90AA5PQ58FG0 334 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 RABGAP1LQ5R372 815 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ADGRF1Q5T601 910 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ATG16L1Q676U5 607 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 Q6ZNB5 142 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ARL10Q8N8L6 244 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 SMRP1Q8NCR6 262 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TADA1Q96BN2 335 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 NSL1Q96IY1 281 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 MECRQ9BV79 373 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 MAGEH1Q9H213 219 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ZNF395Q9H8N7 513 aaPredicted RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 SAR1AQ9NR31 198 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 GALNT8Q9NY28 637 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 DLGAP2Q9P1A6 1054 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 SIRPGQ9P1W8 387 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 LSM7Q9UK45 103 aaKnown RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TCAF1Q9Y4C2 921 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 MYL2P10916 166 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 PFKLP17858 780 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 TYK2P29597 1187 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 SERPINB8P50452 374 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 PDE1CQ14123 709 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 RCN2Q14257 317 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 ZNF354CQ86Y25 554 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 FBXO27Q8NI29 283 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 RANBP9Q96S59 729 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 MYADMQ96S97 322 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 MCMBPQ9BTE3 642 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 IL1RAPL1Q9NZN1 696 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 ZNF510Q9Y2H8 683 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 MYOFQ9NZM1 2061 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 MPOP05164 745 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 ESRRAP11474 423 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 PAMP19021 973 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 LBRQ14739 615 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 TMCO4Q5TGY1 634 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 NUDCD3Q8IVD9 361 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 CNTN4Q8IWV2 1026 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 DCLK2Q8N568 766 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 SCG3Q8WXD2 468 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 ASB16Q96NS5 453 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 AGAP2Q99490 1192 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 IARS2Q9NSE4 1012 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 TAS2R1Q9NYW7 299 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 ZFP37Q9Y6Q3 630 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
CSNK1E-201ENST00000359867 NUP210Q8TEM1 1887 aaPredicted RBP13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 BPGMP07738 259 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 KITP10721 976 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 POLD2P49005 469 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 KLC1Q07866 573 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 ITKQ08881 620 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 ZNF77Q15935 545 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 UGP2Q16851 508 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 FSTL4Q6MZW2 842 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 TPGS1Q6ZTW0 290 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 HTR3DQ70Z44 454 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 RIPOR3Q96MK2 946 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 DDX50Q9BQ39 737 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 LINC00597Q9H2U6 94 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 PLK2Q9NYY3 685 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 MARCOQ9UEW3 520 aaPredicted RBP13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 WNT6Q9Y6F9 365 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 FCHO1O14526 889 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 SIN3BO75182 1162 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 CLDN11O75508 207 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 PSMG1O95456 288 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 MMP2P08253 660 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 ACADSP16219 412 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 VHLP40337 213 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 THOC5Q13769 683 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 POU6F1Q14863 301 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 CHST9Q7L1S5 443 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 SKA1Q96BD8 255 aa13.92□□□□□ -0.18
CSNK1E-201ENST00000359867 ZNF778Q96MU6 729 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms