RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR6K2Q8NGY2 324 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 RP9Q8TA86 221 aaKnown RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 TRNT1Q96Q11 434 aaKnown RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 FOLH1Q04609 750 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 BNIP2Q12982 314 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 SEMA5AQ13591 1074 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 VGLL4Q14135 290 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 MPPE1Q53F39 396 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ART4Q93070 314 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ZNF607Q96SK3 696 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ACO2Q99798 780 aaKnown RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 AGO1Q9UL18 857 aaKnown RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ASTN1O14525 1302 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 TGFBR2P37173 567 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 HJURPQ8NCD3 748 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 PPCDCQ96CD2 204 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 CDH19Q9H159 772 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ZNF214Q9UL59 606 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 RAP2CQ9Y3L5 183 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ATP6AP2A0A1C7CYW4 349 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 HMGB3O15347 200 aaKnown RBP18.41■□□□□ 0.54
SHANK1-202ENST00000359082 ATP6AP2O75787 350 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 SLC35G4P0C7Q5 338 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 CREMQ03060 361 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 ANXA8L1Q5VT79 327 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 DENND5AQ6IQ26 1287 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 RBM23Q86U06 439 aaKnown RBP18.41■□□□□ 0.54
SHANK1-202ENST00000359082 GPR180Q86V85 440 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 FUKQ8N0W3 1084 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 LRRC17Q8N6Y2 441 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 LRMDAQ9H2I8 198 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 SPATA31D3P0C874 917 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 PRKAR1AP10644 381 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 IL12AP29459 219 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 GRB14Q14449 540 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 SUZ12Q15022 739 aaKnown RBP18.41■□□□□ 0.54
SHANK1-202ENST00000359082 TMEM63BQ5T3F8 832 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 SPATA31D4Q6ZUB0 917 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 KAZALD1Q96I82 304 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 OPLAHO14841 1288 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 SNAP91O60641 907 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 FADS2O95864 444 aaKnown RBP18.41■□□□□ 0.54
SHANK1-202ENST00000359082 UGT1A5P35504 534 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 MEA1Q16626 185 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 MCMBPQ9BTE3 642 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 AARSD1Q9BTE6 412 aaKnown RBP18.41■□□□□ 0.54
SHANK1-202ENST00000359082 EQTNQ9NQ60 294 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 XPR1Q9UBH6 696 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 KLF15Q9UIH9 416 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 ITGB1BP2Q9UKP3 347 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 ING4Q9UNL4 249 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 HAT1O14929 419 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 BST1Q10588 318 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 LSM12Q3MHD2 195 aaKnown RBP18.41■□□□□ 0.54
SHANK1-202ENST00000359082 GALNT5Q7Z7M9 940 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 PIGZQ86VD9 579 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 CLHC1Q8NHS4 586 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 WDR60Q8WVS4 1066 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 SGK2Q9HBY8 427 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 ASF1AQ9Y294 204 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 PGK1P00558 417 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 PNPOQ9NVS9 261 aa18.41■□□□□ 0.54
SHANK1-202ENST00000359082 UNC5CO95185 931 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 SLC25A14O95258 325 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 SLC6A2P23975 617 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 KCNJ2P63252 427 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 CBX2Q14781 532 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 RAVER1Q8IY67 606 aaKnown RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 C12orf29Q8N999 325 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 FCRL4Q96PJ5 515 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 PRRG4Q9BZD6 226 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 NCANO14594 1321 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 AZIN1O14977 448 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 SERPINB7O75635 380 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 C9P02748 559 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 VEGFAP15692 232 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 HTR1BP28222 390 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 NRG1Q02297 640 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 ILDR1Q86SU0 546 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 AP3S1Q92572 193 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 SUV39H1O43463 412 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 CYP3A4P08684 503 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 MTX3Q5HYI7 312 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 UBE2R2Q712K3 238 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 KBTBD7Q8WVZ9 684 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 TBC1D10AQ9BXI6 508 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 PCYOX1Q9UHG3 505 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 PSMD13Q9UNM6 376 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 SORCS3Q9UPU3 1222 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 NEDD8-MDP1E9PL57 170 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 SERPINA6P08185 405 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 LPOP22079 712 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 ITPKBP27987 946 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 MAPK8P45983 427 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 MANFP55145 182 aaKnown RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 MRPL45Q9BRJ2 306 aaKnown RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 ING3Q9NXR8 418 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 PRKAB1Q9Y478 270 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 SNX3O60493 162 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 GABRB2P47870 512 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms