RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 RPRD1AQ96P16 312 aaPredicted RBP1.91□□□□□ -2.1
SMARCAD1-202ENST00000359052 GSDMAQ96QA5 445 aa1.91□□□□□ -2.1
SMARCAD1-202ENST00000359052 LZTS2Q9BRK4 669 aa1.91□□□□□ -2.1
SMARCAD1-202ENST00000359052 INIPQ9NRY2 104 aa1.91□□□□□ -2.1
SMARCAD1-202ENST00000359052 ADPRHL2Q9NX46 363 aa1.91□□□□□ -2.1
SMARCAD1-202ENST00000359052 USP21Q9UK80 565 aa1.91□□□□□ -2.1
SMARCAD1-202ENST00000359052 WDR33Q9C0J8 1336 aaKnown RBP1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 CFAP47Q6ZTR5 3102 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 A0A1W2PPC1 479 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 SH3PXD2BA1X283 911 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 ZNF99A8MXY4 864 aaPredicted RBP1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 E7EVH7 732 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 IFIT3O14879 490 aaKnown RBP1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 CAPN5O15484 640 aaPredicted RBP1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 ASMTP46597 345 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 RPS3AP61247 264 aaKnown RBP1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 IL24Q13007 206 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 PDZK1IP1Q13113 114 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 SLAMF1Q13291 335 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 TAZQ16635 292 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 DEPDC1Q5TB30 811 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 MROH9Q5TGP6 573 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 RAB11FIP2Q7L804 512 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 KSR1Q8IVT5 923 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 ZDHHC23Q8IYP9 409 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 ANKRD53Q8N9V6 530 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 ETNPPLQ8TBG4 499 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 CD99L2Q8TCZ2 262 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 PRPF31Q8WWY3 499 aaKnown RBP1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 HAPLN3Q96S86 360 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 CARD9Q9H257 536 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 ATXN3LQ9H3M9 355 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 LMBRD1Q9NUN5 540 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 AP5S1Q9NUS5 200 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 ARL8BQ9NVJ2 186 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 KCND2Q9NZV8 630 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 CHRNA9Q9UGM1 479 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 NOC2LQ9Y3T9 749 aaKnown RBP1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 PCDHA10Q9Y5I2 948 aa1.9□□□□□ -2.1
SMARCAD1-202ENST00000359052 OR5K4A6NMS3 321 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 A8MVJ9 347 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 H0YAE9 185 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SELENOFO60613 162 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 FRAT2O75474 233 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 FTCDO95954 541 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 FTLP02792 175 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ATP5BP06576 529 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 FGF4P08620 206 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 GNAT2P19087 354 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 HNF1BP35680 557 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 IFNAR2P48551 515 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 BCAT1P54687 386 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SRSF11Q05519 484 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 MSMPQ1L6U9 139 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 UAP1L1Q3KQV9 507 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 EARS2Q5JPH6 523 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 C20orf194Q5TEA3 1177 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RRAGBQ5VZM2 374 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 OLFML2BQ68BL8 750 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 KIAA0930Q6ICG6 404 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 GRHL2Q6ISB3 625 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC39A5Q6ZMH5 540 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 LRRC8DQ7L1W4 858 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TRIM74Q86UV6 250 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TRIM73Q86UV7 250 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PQLC3Q8N755 202 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 GIMAP7Q8NHV1 300 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ARHGAP45Q92619 1136 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PABPC5Q96DU9 382 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TSPAN17Q96FV3 270 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CLPTM1LQ96KA5 538 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 MTMR9Q96QG7 549 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 C1QTNF5Q9BXJ0 243 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 WWTR1Q9GZV5 400 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TTYH1Q9H313 450 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ATP13A1Q9HD20 1204 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RAB21Q9UL25 225 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 NUDCQ9Y266 331 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CSADQ9Y600 493 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 WASF2Q9Y6W5 498 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 LOC105371267A0A1B0GV96 52 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCDC69A6NI79 296 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 SRRM3A6NNA2 597 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 F8VZ95 297 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PPEF2O14830 753 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZC3H11AO75152 810 aaKnown RBP eCLIP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RHBDL1O75783 438 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CRYGBP07316 175 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCDC172P0C7W6 258 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 THEGLP0DJG4 465 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 TUBG1P23258 451 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 COL8A1P27658 744 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 MSX2P35548 267 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ECI1P42126 302 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 OR3A1P47881 315 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 PLXNA3P51805 1871 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 ACTR1AP61163 376 aa1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 MAT1AQ00266 395 aaKnown RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 RSPO4Q2I0M5 234 aaPredicted RBP1.9□□□□□ -2.11
SMARCAD1-202ENST00000359052 CDONQ4KMG0 1287 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms