RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ADCY4Q8NFM4 1077 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 IGSF8Q969P0 613 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ASB9Q96DX5 294 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 CYP2S1Q96SQ9 504 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 A0A0U1RQS6 177 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 VILLO15195 856 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 PEX11BO96011 259 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 RPL9P32969 192 aaKnown RBP20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ACVRL1P37023 503 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 SH3BP2P78314 561 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 STX5Q13190 355 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 HERC3Q15034 1050 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 BRMS1LQ5PSV4 323 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 KLHDC10Q6PID8 442 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ISCA2Q86U28 154 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 CFAP52Q8N1V2 620 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 PTGR2Q8N8N7 351 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ZFP28Q8NHY6 868 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ESAMQ96AP7 390 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 MYEOVQ96EZ4 313 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 SLC25A51Q9H1U9 297 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 CAAP1Q9H8G2 361 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 EML4Q9HC35 981 aaKnown RBP20.5■□□□□ 0.87
COL13A1-202ENST00000357811 MID1IP1Q9NPA3 183 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 TBC1D13Q9NVG8 400 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 GMIPQ9P107 970 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 BCAP29Q9UHQ4 241 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 FAM50BQ9Y247 325 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 SLC45A1Q9Y2W3 748 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 UBA6A0AVT1 1052 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SAC3D1A6NKF1 404 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 FAM58BPP0C7Q3 252 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 DNAJB2P25686 324 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 RPL5P46777 297 aaKnown RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 KPNA2P52292 529 aaKnown RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 EIF4EBP2Q13542 120 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 LRRC23Q53EV4 343 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 RETREG3Q86VR2 466 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 TICAM1Q8IUC6 712 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 PGBD5Q8N414 524 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 LZTR1Q8N653 840 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 TRPV1Q8NER1 839 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SLCO4A1Q96BD0 722 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 EXOC2Q96KP1 924 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 PKMYT1Q99640 499 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 VCX3AQ9NNX9 186 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SPAG4Q9NPE6 437 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SLC4A7Q9Y6M7 1214 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 PLOD2O00469 737 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 TNFRSF10BO14763 440 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 AKAP10O43572 662 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 GRB7Q14451 532 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 KLHDC9Q8NEP7 349 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 IMP4Q96G21 291 aaKnown RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 UNC93B1Q9H1C4 597 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 AKTIPQ9H8T0 292 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 RAB26Q9ULW5 256 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 hCG_2014768A0A024R1R8 64 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 NRP2O60462 931 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 S1PR4O95977 384 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 MMP2P08253 660 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 LINC00032P0C843 101 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF26P17031 533 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 RENBPP51606 427 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF135P52742 658 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SQLEQ14534 574 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SEMA3AQ14563 771 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 MAP7D1Q3KQU3 841 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 TRPC4APQ8TEL6 797 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 CANT1Q8WVQ1 401 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SEMA3CQ99985 751 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 PIF1Q9H611 641 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 LIN28AQ9H9Z2 209 aaKnown RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 MEAF6Q9HAF1 191 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 SLC27A5Q9Y2P5 690 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 HEMK1Q9Y5R4 338 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-202ENST00000357811 V9GYQ6 96 aa20.49■□□□□ 0.87
COL13A1-202ENST00000357811 PSMC3P17980 439 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 CASP2P42575 452 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 LEPRP48357 1165 aaKnown RBP20.48■□□□□ 0.87
COL13A1-202ENST00000357811 CDH15P55291 814 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 FUNDC1Q8IVP5 155 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 TMIGD2Q96BF3 282 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 C19orf60Q96EN9 201 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 PRKD2Q9BZL6 878 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 VPS28Q9UK41 221 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 CROTQ9UKG9 612 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 COMMD3-BMI1R4GMX3 469 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 CROCCQ5TZA2 2017 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 H3BSA7 217 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 PDLIM1O00151 329 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 HK2P52789 917 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 TBX4P57082 545 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 DNAJB13P59910 316 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 LSAMPQ13449 338 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 UNC50Q53HI1 259 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 MS4A13Q5J8X5 152 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 UBXN10Q96LJ8 280 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 RPRD1AQ96P16 312 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms