RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 PCDH9Q9HC56 1237 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 L1RE1Q9UN81 338 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 NEO1Q92859 1461 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 METTL18O95568 372 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 ATF4P18848 351 aaPredicted RBP10.57□□□□□ -0.72
FXR1-202ENST00000357559 PSMD8P48556 350 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 PGDP52209 483 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 ALG1LQ6GMV1 187 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 FBXO15Q8NCQ5 510 aaPredicted RBP10.57□□□□□ -0.72
FXR1-202ENST00000357559 ARMC5Q96C12 935 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 NPAS2Q99743 824 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 C11orf16Q9NQ32 467 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 MED31Q9Y3C7 131 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 NT5C1B-RDH14C9J2C7 533 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 RB1P06400 928 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 SLC35G4P0C7Q5 338 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 HELQQ8TDG4 1101 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 LINGO1Q96FE5 620 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 MAPRE3Q9UPY8 281 aa10.57□□□□□ -0.72
FXR1-202ENST00000357559 CCDC163A0A0D9SF12 145 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 UBA1P22314 1058 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 ZBTB6Q15916 424 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 FSCN1Q16658 493 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 RTL4Q6ZR62 310 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 MCOLN2Q8IZK6 566 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 OR8H3Q8N146 312 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 FAM110BQ8TC76 370 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ZNF607Q96SK3 696 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 GAD1Q99259 594 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ZNF184Q99676 751 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 PTPN18Q99952 460 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ACE2Q9BYF1 805 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 KIAA1683Q9H0B3 1180 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 SLC24A2Q9UI40 661 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ENTPD3O75355 529 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 SNRPB2P08579 225 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 ELFN1P0C7U0 828 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 HDCP19113 662 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ALDH5A1P51649 535 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 ANKS1BQ7Z6G8 1248 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ZBTB8BQ8NAP8 495 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 MOCS1Q9NZB8 636 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 CCDC59Q9P031 241 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 TBC1D30Q9Y2I9 924 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 AXIN1O15169 862 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 MSL3P1P0C860 447 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 PECAM1P16284 738 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 AHCYP23526 432 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 CAP2P40123 477 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 TNK2Q07912 1038 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 IKBKEQ14164 716 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 HKDC1Q2TB90 917 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 C9orf64Q5T6V5 341 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 AKAP14Q86UN6 197 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 PPP1R14BQ96C90 147 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 MBOAT7Q96N66 472 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 WRAP53Q9BUR4 548 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 MECRQ9BV79 373 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ULBP1Q9BZM6 244 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 MTF2Q9Y483 593 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 CATP04040 527 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 CYP1A1P04798 512 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 FCER2P06734 321 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 NR4A1P22736 598 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 MIPP30301 263 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 GSTT1P30711 240 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 GRK5P34947 590 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ADCYAP1R1P41586 468 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 CDK16Q00536 496 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ACVR2BQ13705 512 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 ALYREFQ86V81 257 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 C17orf75Q9HAS0 396 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 OR12D3Q9UGF7 316 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 IFNGP01579 166 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 LTA4HP09960 611 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 YAP1P46937 504 aaKnown RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 HHIPL2Q6UWX4 724 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 C12orf50Q8NA57 414 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 CRELD1Q96HD1 420 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 HES2Q9Y543 173 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 AKAP3O75969 853 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 GJA8P48165 433 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 FOXM1Q08050 763 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 USF2Q15853 346 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 FBXO48Q5FWF7 155 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 DENND6BQ8NEG7 585 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 TNFAIP8L1Q8WVP5 186 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 COQ8BQ96D53 544 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 CCDC120Q96HB5 630 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 CRAMP1Q96RY5 1269 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 C1QTNF3-AMACRE9PGA6 284 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 FSHRP23945 695 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
FXR1-202ENST00000357559 SCNN1GP51170 649 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 LRP8Q14114 963 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
FXR1-202ENST00000357559 OGFRL1Q5TC84 451 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms