RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CUL1Q13616 776 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 FASTKD3Q14CZ7 662 aaKnown RBP25.44■■□□□ 1.66
SSBP3-202ENST00000357475 CNGA3Q16281 694 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 HIF1AQ16665 826 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 BBS9Q3SYG4 887 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 LRRC66Q68CR7 880 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 RFLNAQ6ZTI6 216 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 IGDCC3Q8IVU1 814 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 SIGLEC10Q96LC7 697 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 LYSMD1Q96S90 227 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 NCKAP1Q9Y2A7 1128 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 PLXND1Q9Y4D7 1925 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 USP34Q70CQ2 3546 aa25.44■■□□□ 1.66
SSBP3-202ENST00000357475 C1orf232A0A0U1RR37 186 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 PRR23AA6NEV1 266 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 SMAPO00193 183 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 IGLV3-19P01714 112 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 CAV1Q03135 178 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 CSTF1Q05048 431 aaKnown RBP25.43■■□□□ 1.66
SSBP3-202ENST00000357475 SEPT6Q14141 434 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 MAP7D1Q3KQU3 841 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 ERAP2Q6P179 960 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 KBTBD6Q86V97 674 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 TTC30BQ8N4P2 665 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 RAB7BQ96AH8 199 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 ZNF778Q96MU6 729 aa25.43■■□□□ 1.66
SSBP3-202ENST00000357475 FAM47DPA6NHR8 397 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 AXIN1O15169 862 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 LDB2O43679 373 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 GPR37L1O60883 481 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 GM2AP17900 193 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 FNTBP49356 437 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 ARL4CP56559 192 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 PTSQ03393 145 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 GLT6D1Q7Z4J2 308 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 NDUFAF2Q8N183 169 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 PARD6BQ9BYG5 372 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.42■■□□□ 1.662e-7■□□□□ 10.3
SSBP3-202ENST00000357475 COQ6Q9Y2Z9 468 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 TRPM6Q9BX84 2022 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 IGHV1OR15-9A0A0B4J2B8 117 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 NEMP1O14524 444 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 NDC80O14777 642 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 SLC7A4O43246 635 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 MMP20O60882 483 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 PPFIA2O75334 1257 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 C1SP09871 688 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 FAM153BP0C7A2 387 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 NPY2RP49146 381 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 LIG3P49916 1009 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 PDIA2Q13087 525 aaKnown RBP25.42■■□□□ 1.66
SSBP3-202ENST00000357475 FAM153CQ494X1 144 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 TMEM52BQ4KMG9 183 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 LIPIQ6XZB0 460 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 HSD11B1LQ7Z5J1 315 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 CCDC25Q86WR0 208 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 PDIK1LQ8N165 341 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 BRSK1Q8TDC3 778 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 TOE1Q96GM8 510 aaKnown RBP25.42■■□□□ 1.66
SSBP3-202ENST00000357475 BPIFA1Q9NP55 256 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 CHRAC1Q9NRG0 131 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 BFARQ9NZS9 450 aa25.42■■□□□ 1.66
SSBP3-202ENST00000357475 MBD1Q9UIS9 605 aaPredicted RBP25.42■■□□□ 1.66
SSBP3-202ENST00000357475 ZFR2Q9UPR6 939 aaKnown RBP25.42■■□□□ 1.66
SSBP3-202ENST00000357475 E7ESA3 106 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 AP1G1O43747 822 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 CYP2A6P11509 494 aaPredicted RBP25.41■■□□□ 1.66
SSBP3-202ENST00000357475 SUOXP51687 545 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 PPP2CBP62714 309 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 PPP2CAP67775 309 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 ELP6Q0PNE2 266 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 SEL1L3Q68CR1 1132 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 CES3Q6UWW8 571 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 ANKMY2Q8IV38 441 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 GPR63Q9BZJ6 419 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 IL22Q9GZX6 179 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 BTBD1Q9H0C5 482 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 ZFYVE1Q9HBF4 777 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 SLC2A6Q9UGQ3 507 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 TCAF1Q9Y4C2 921 aa25.41■■□□□ 1.66
SSBP3-202ENST00000357475 SDR42E2A6NKP2 422 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 CCL22O00626 93 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 PCDH8O95206 1070 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 TNFRSF8P28908 595 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 HOXA6P31267 233 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 ELK3P41970 407 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 CASC4Q6P4E1 433 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 CCNI2Q6ZMN8 369 aaPredicted RBP25.4■■□□□ 1.66
SSBP3-202ENST00000357475 TMC3Q7Z5M5 1100 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 GPR161Q8N6U8 529 aaKnown RBP25.4■■□□□ 1.66
SSBP3-202ENST00000357475 OR13C4Q8NGS5 318 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 FMO2Q99518 471 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 FRMD8Q9BZ67 464 aaPredicted RBP25.4■■□□□ 1.66
SSBP3-202ENST00000357475 SAYSD1Q9NPB0 183 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 WSB2Q9NYS7 404 aaPredicted RBP25.4■■□□□ 1.66
SSBP3-202ENST00000357475 CHMP2BQ9UQN3 213 aa25.4■■□□□ 1.66
SSBP3-202ENST00000357475 MROH6A6NGR9 719 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 ZNF217O75362 1048 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 CD6P30203 668 aa25.39■■□□□ 1.66
SSBP3-202ENST00000357475 ZNF140P52738 457 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms