RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TMPRSS4Q9NRS4 437 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 PCDHA9Q9Y5H5 950 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 FAM95CA0A1B0GW59 222 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 INO80B-WBP1J3KQ70 363 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 ABCB7O75027 752 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 EIF2S1P05198 315 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 GJB1P08034 283 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 STMN1P16949 149 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 PTPN2P17706 415 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 ARNTP27540 789 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 LEPRP48357 1165 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 AQP6Q13520 282 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 SNX17Q15036 470 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 TTC30BQ8N4P2 665 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 SNX31Q8N9S9 440 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 VMP1Q96GC9 406 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 RAD21L1Q9H4I0 556 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 DPP3Q9NY33 737 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 NEMP2A6NFY4 417 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 A8MT66 165 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 CLDN25C9JDP6 229 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 UBFD1O14562 309 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 CACNG3O60359 315 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 YWHAQP27348 245 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 HPCAL1P37235 193 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 FOXM1Q08050 763 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 SEMA3BQ13214 749 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 FXNQ16595 210 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 COQ5Q5HYK3 327 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 PARP8Q8N3A8 854 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 SFRP1Q8N474 314 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 SPATA6LQ8N4H0 392 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 SEPT1Q8WYJ6 367 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 DCPSQ96C86 337 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 CCDC126Q96EE4 140 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 CPB2Q96IY4 423 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 CTRCQ99895 268 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 TEX13BQ9BXU2 312 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 GSTO2Q9H4Y5 243 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 TRHDEQ9UKU6 1024 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 NDUFAF1Q9Y375 327 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 TLL2Q9Y6L7 1015 aa12.15□□□□□ -0.46
SMARCAL1-201ENST00000357276 IPO13O94829 963 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 ALOX5P09917 674 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 SAT1P21673 171 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 PLA2G16P53816 162 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 IFITM3Q01628 133 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 BROXQ5VW32 411 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 MAGED2Q9UNF1 606 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 TSC22D4Q9Y3Q8 395 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 AP3B1O00203 1094 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 CAPN3P20807 821 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 EDNRBP24530 442 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 KPNA1P52294 538 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 BACE1P56817 501 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 CDH17Q12864 832 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 SPCS2Q15005 226 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 C12orf42Q96LP6 360 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 SOX17Q9H6I2 414 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 PRMT7Q9NVM4 692 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 GPRC5DQ9NZD1 345 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 EGFL7Q9UHF1 273 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
SMARCAL1-201ENST00000357276 NCAM2O15394 837 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 B4GAT1O43505 415 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 SYNCRIPO60506 623 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 GPC4O75487 556 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 PRSS23O95084 383 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 KCNH1O95259 989 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 UMPSP11172 480 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 TPH1P17752 444 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 S100A1P23297 94 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 CRHBPP24387 322 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 ELK4P28324 431 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 TAS2R39P59534 338 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 KCNJ8Q15842 424 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 CLPPQ16740 277 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 MAP7D1Q3KQU3 841 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 TBPL2Q6SJ96 375 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZBTB46Q86UZ6 589 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 PHYKPLQ8IUZ5 450 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 DENND6AQ8IWF6 608 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 HDAC11Q96DB2 347 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 MAGED4Q96JG8 741 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 C3orf30Q96M34 536 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 NPY6RQ99463 290 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 FBRSL1Q9HCM7 1045 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 TRPV5Q9NQA5 729 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 ZNF112Q9UJU3 913 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 SHROOM3Q8TF72 1996 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 EVPLQ92817 2033 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 A0A0J9YYE9 177 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 MATN4O95460 622 aa12.13□□□□□ -0.47
SMARCAL1-201ENST00000357276 KPNA2P52292 529 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms