RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ATP6V1B2P21281 511 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 PEX6Q13608 980 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 NFYCQ13952 458 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 IQSEC1Q6DN90 963 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 SLC44A5Q8NCS7 719 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 ZNF606Q8WXB4 792 aa6.59□□□□□ -1.35
TRIM38-201ENST00000357085 E2F8A0AVK6 867 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 EFCAB10A6NFE3 127 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 OGTO15294 1046 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 INPP4BO15327 924 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 KCNH1O95259 989 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 RPLP0P05388 317 aaKnown RBP6.59□□□□□ -1.36
TRIM38-201ENST00000357085 ZSCAN5DPP0CG00 497 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 GRIA4P48058 902 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 SESN2P58004 480 aaPredicted RBP6.59□□□□□ -1.36
TRIM38-201ENST00000357085 CCNJQ5T5M9 372 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 DDI2Q5TDH0 399 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 IER5Q5VY09 327 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 STEAP4Q687X5 459 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 PRSS48Q7RTY5 328 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF605Q86T29 641 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 IFNEQ86WN2 208 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 GALNT12Q8IXK2 581 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 FIBCD1Q8N539 461 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 JPH3Q8WXH2 748 aaPredicted RBP6.59□□□□□ -1.36
TRIM38-201ENST00000357085 PACSIN3Q9UKS6 424 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 COL18A1P39060 1754 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 ASS1P00966 412 aaKnown RBP6.59□□□□□ -1.36
TRIM38-201ENST00000357085 XRCC1P18887 633 aaPredicted RBP6.59□□□□□ -1.36
TRIM38-201ENST00000357085 CYP2F1P24903 491 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 ANXA11P50995 505 aaKnown RBP6.59□□□□□ -1.36
TRIM38-201ENST00000357085 CDH15P55291 814 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 RPS3AP61247 264 aaKnown RBP6.59□□□□□ -1.36
TRIM38-201ENST00000357085 PLEKHG4Q58EX7 1191 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 FRMD7Q6ZUT3 714 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 LRRC17Q8N6Y2 441 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 FAR1Q8WVX9 515 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 PKP2Q99959 881 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 AIFM2Q9BRQ8 373 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 SPATA9Q9BWV2 254 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 V9GYQ6 96 aa6.59□□□□□ -1.36
TRIM38-201ENST00000357085 DOT1LQ8TEK3 1739 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PPEF1O14829 653 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PRKD3O94806 890 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PKLRP30613 574 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CCT3P49368 545 aaKnown RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CRY1Q16526 586 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PCID2Q5JVF3 399 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CELF1Q92879 486 aaKnown RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 AP2M1Q96CW1 435 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ELMO2Q96JJ3 720 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PAK6Q9NQU5 681 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ADPRHL2Q9NX46 363 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 TOR4AQ9NXH8 423 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ZIM2Q9NZV7 527 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CPQQ9Y646 472 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 HPCAL1P37235 193 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 NDST2P52849 883 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SEMA5AQ13591 1074 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ZACNQ401N2 412 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SLC9A4Q6AI14 798 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 NEPROQ6NW34 567 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CYP4Z1Q86W10 505 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 GATAD2AQ86YP4 633 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 TFAP2CQ92754 450 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MTMR12Q9C0I1 747 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MAGIXQ9H6Y5 334 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PNPOQ9NVS9 261 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 TEX264Q9Y6I9 313 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SPATA31A5Q5VU36 1347 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SPATA31A7Q8IWB4 1347 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 TSPAN4O14817 238 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PIGNO95427 931 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PCSK6P29122 969 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PTPN9P43378 593 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 SEPHS1P49903 392 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 AP3S2P59780 193 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 DGCR6Q14129 220 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF568Q3ZCX4 644 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ERFEQ4G0M1 354 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 C10orf107Q8IVU9 208 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MEAF6Q9HAF1 191 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 HSFX1Q9UBD0 423 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MAN2B2Q9Y2E5 1009 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 RGS5O15539 181 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 RFPL2O75678 378 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 S100A9P06702 114 aaKnown RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CDH5P33151 784 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 IKBKEQ14164 716 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 RBBP7Q16576 425 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 FNBP1LQ5T0N5 605 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 OTUD3Q5T2D3 398 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CYP4Z2PQ8N1L4 340 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 MCOLN3Q8TDD5 553 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 ACSF2Q96CM8 615 aaPredicted RBP6.58□□□□□ -1.36
TRIM38-201ENST00000357085 PPP3R2Q96LZ3 170 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 KCNK13Q9HB14 408 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 FBXO8Q9NRD0 319 aa6.58□□□□□ -1.36
TRIM38-201ENST00000357085 CCM2LQ9NUG4 571 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms