RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AGAP2Q99490 1192 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 PRDM6Q9NQX0 595 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 IL36AQ9UHA7 158 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 GGT7Q9UJ14 662 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 PIAS3Q9Y6X2 628 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 CKAP5Q14008 2032 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 IQANK1A0A1B0GTG1 560 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 SIN3BO75182 1162 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 HNRNPLP14866 589 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 TNFRSF4P43489 277 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 TEDDM1Q5T9Z0 273 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 PDPK2PQ6A1A2 396 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 GLT6D1Q7Z4J2 308 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 SUGP1Q8IWZ8 645 aaKnown RBP18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 STK40Q8N2I9 435 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 OR13C4Q8NGS5 318 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 MAGEE1Q9HCI5 957 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 CACNA2D2Q9NY47 1150 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 RIMKLBQ9ULI2 386 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 PPIL1Q9Y3C6 166 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 ZNF711Q9Y462 761 aa18.2■□□□□ 0.5
SMARCD3-202ENST00000356800 CRTAMO95727 393 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 F7P08709 466 aaPredicted RBP18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 KRT15P19012 456 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 PSMA3P25788 255 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 HNF1BP35680 557 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 KIR2DL1P43626 348 aaPredicted RBP18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 ATP1A2P50993 1020 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 GABPB1Q06547 395 aaPredicted RBP18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 LAMB3Q13751 1172 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 ENPP2Q13822 863 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 CDKN3Q16667 212 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 LGSNQ5TDP6 509 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 RALGPS2Q86X27 583 aaPredicted RBP18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 SRRM1Q8IYB3 904 aaKnown RBP18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 PEX13Q92968 403 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 EID2BQ96D98 161 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 FAM129BQ96TA1 746 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 IARS2Q9NSE4 1012 aaKnown RBP18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 PSD3Q9NYI0 1048 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 HACD3Q9P035 362 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 ZFATQ9P243 1243 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 PHTF1Q9UMS5 762 aa18.19■□□□□ 0.5
SMARCD3-202ENST00000356800 TSPAN11A1L157 253 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 CAPN8A6NHC0 703 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SHISA7A6NL88 538 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 LOC730098B7Z3J9 87 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SLC4A1P02730 911 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SERPINB9P50453 376 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 TMPRSS15P98073 1019 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 PON2Q15165 354 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 FSTL4Q6MZW2 842 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 NUDT18Q6ZVK8 323 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 LYSMD3Q7Z3D4 306 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 PAF1Q8N7H5 531 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 OR4K2Q8NGD2 314 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 STYXQ8WUJ0 223 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 HDAC10Q969S8 669 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 LRIG1Q96JA1 1093 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 TBATAQ96M53 351 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 C8orf33Q9H7E9 229 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SUDS3Q9H7L9 328 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 NLE1Q9NVX2 485 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 POLR3BQ9NW08 1133 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SARDHQ9UL12 918 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 STON1Q9Y6Q2 735 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 ZNF106Q9H2Y7 1883 aaKnown RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 NPIPB15A6NHN6 443 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 KRT37O76014 449 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 EGFP01133 1207 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 PAMP19021 973 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 LPOP22079 712 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 CNTFP26441 200 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 METAP1P53582 386 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SEC13P55735 322 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SEMG2Q02383 582 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 TMEM196Q5HYL7 178 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 PACS1Q6VY07 963 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 CNTN4Q8IWV2 1026 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 ZNF513Q8N8E2 541 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 MTBPQ96DY7 904 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 SCRN2Q96FV2 425 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 MCCC1Q96RQ3 725 aaPredicted RBP18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 LYSMD1Q96S90 227 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 OSBPL1AQ9BXW6 950 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 PRSS16Q9NQE7 514 aa18.18■□□□□ 0.5
SMARCD3-202ENST00000356800 HMX2A2RU54 273 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 OR51F1A6NGY5 319 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 C2orf81A6NN90 581 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 SLC7A4O43246 635 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 SHOX2O60902 331 aaPredicted RBP18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 RPP40O75818 363 aaKnown RBP18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 KRT38O76015 456 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 SNRPAP09012 282 aaKnown RBP18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 BRAFP15056 766 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 WASP42768 502 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 ELAVL3Q14576 367 aaKnown RBP18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 POM121L1PQ3SYA9 428 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 ZNF805Q5CZA5 627 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 LRRC73Q5JTD7 316 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms