RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PIGHQ14442 188 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ARHGAP40Q5TG30 622 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 LIPIQ6XZB0 460 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 DPPA4Q7L190 304 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ZSWIM9Q86XI8 627 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 NDUFAF2Q8N183 169 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ARFGAP1Q8N6T3 406 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 PLA2G15Q8NCC3 412 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 PTCD2Q8WV60 388 aaKnown RBP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 HSPH1Q92598 858 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 FUBP1Q96AE4 644 aaKnown RBP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 CCDC74AQ96AQ1 378 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ECHDC3Q96DC8 303 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 TMEM74Q96NL1 305 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 PEBP4Q96S96 227 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 RBM15Q96T37 977 aaKnown RBP eCLIP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 DPEP2Q9H4A9 486 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 CPNE5Q9HCH3 593 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 EPB41L5Q9HCM4 733 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 CYP4F12Q9HCS2 524 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ASCL3Q9NQ33 180 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 DGKBQ9Y6T7 804 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ATMQ13315 3056 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 A0A1B0GTH6 734 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 TMEM202A6NGA9 273 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 DDX3XO00571 662 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 TNFRSF10CO14798 259 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 RPLP0P05388 317 aaKnown RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 CYP2A6P11509 494 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 GLB1P16278 677 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 AMPD1P23109 780 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 SERPINB6P35237 376 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 SSR1P43307 286 aaKnown RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 INHBCP55103 352 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 CDH6P55285 790 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 KIAA1024LP59773 190 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 CCL7P80098 99 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 RHDQ02161 417 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 VAC14Q08AM6 782 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 EIF3IQ13347 325 aaKnown RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 BIRC2Q13490 618 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 PEX6Q13608 980 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 NR1I3Q14994 352 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 NFKBIBQ15653 356 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 SMTNL2Q2TAL5 461 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 TDRD12Q587J7 1177 aaKnown RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 MARC1Q5VT66 337 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 DENND2CQ68D51 928 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 PNCKQ6P2M8 343 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 ARHGAP36Q6ZRI8 547 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 ARHGAP12Q8IWW6 846 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 FBXO39Q8N4B4 442 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 NPWQ8N729 165 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 Q8N9G6 341 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 KYQ8NBH2 561 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 NAP1L5Q96NT1 182 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 TRIM7Q9C029 511 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 ISCUQ9H1K1 167 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 LRRN3Q9H3W5 708 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 WDR26Q9H7D7 661 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 HAUS2Q9NVX0 235 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 TMEM63CQ9P1W3 806 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 IP6K2Q9UHH9 426 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 PHTF1Q9UMS5 762 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 PCDHGC4Q9Y5F7 938 aa10.69□□□□□ -0.7
CAPN3-204ENST00000356316 SMG1Q96Q15 3661 aaKnown RBP10.69□□□□□ -0.7
CAPN3-204ENST00000356316 ASXL3Q9C0F0 2248 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 TTC24A2A3L6 582 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-204ENST00000356316 GOLGA6CA6NDK9 693 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 GOLGA6BA6NDN3 693 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 ERVH48-1M5A8F1 160 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 NTN3O00634 580 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-204ENST00000356316 TRAFD1O14545 582 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-204ENST00000356316 PLD2O14939 933 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 SOCS5O75159 536 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 CPP00450 1065 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 PRB1P04280 392 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 ITGA2BP08514 1039 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 JMJD7P0C870 316 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 GOLGA6DP0CG33 693 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 PNLIPP16233 465 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 TRIM23P36406 574 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 ITKQ08881 620 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 RALGDSQ12967 914 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 DPYSQ14117 519 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 KRT81Q14533 505 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 DPYSL2Q16555 572 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 FIGNQ5HY92 759 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 CCDC122Q5T0U0 273 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
CAPN3-204ENST00000356316 CCDC81Q6ZN84 652 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 RAB11FIP2Q7L804 512 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 POLNQ7Z5Q5 900 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 ZNF605Q86T29 641 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 JAMLQ86YT9 394 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 ATPAF2Q8N5M1 289 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 KIAA1524Q8TCG1 905 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 OR1E3Q8WZA6 343 aa10.68□□□□□ -0.7
CAPN3-204ENST00000356316 NUS1Q96E22 293 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms