RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TMEM110Q86TL2 294 aa11.06□□□□□ -0.64
GTF3C1-201ENST00000356183 RALGPS2Q86X27 583 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-201ENST00000356183 CIR1Q86X95 450 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-201ENST00000356183 ITFG2Q969R8 447 aa11.06□□□□□ -0.64
GTF3C1-201ENST00000356183 INTS7Q9NVH2 962 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-201ENST00000356183 ITGA11Q9UKX5 1188 aa11.06□□□□□ -0.64
GTF3C1-201ENST00000356183 TNPO3Q9Y5L0 923 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-201ENST00000356183 C19orf81C9J6K1 198 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 WRBO00258 174 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 RFXANKO14593 260 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 IGSF6O95976 241 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 MARSP56192 900 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 LAMTOR4Q0VGL1 99 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 LIPMQ5VYY2 423 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 FAM43BQ6ZT52 329 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 JAZF1Q86VZ6 243 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 STAG3L4Q8TBR4 150 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 CCNB1IP1Q9NPC3 277 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 IFT46Q9NQC8 304 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 PCYOX1Q9UHG3 505 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF214Q9UL59 606 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 REXO2Q9Y3B8 237 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 A0A0G2JPF8 293 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ATP6AP2A0A1C7CYW4 349 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 HNRNPCL3B7ZW38 293 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SUV39H1O43463 412 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 RGS10O43665 173 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ATP6V1G1O75348 118 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ERN1O75460 977 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ATP6AP2O75787 350 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 HNRNPCL4P0DMR1 293 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ATF6P18850 670 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 IGFBP5P24593 272 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 IRAK1BP1Q5VVH5 260 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ZZZ3Q8IYH5 903 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 RNF31Q96EP0 1072 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 INTS10Q9NVR2 710 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 GIN1Q9NXP7 522 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 GNEQ9Y223 722 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 PLOD2O00469 737 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 TRMUO75648 421 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ANXA5P08758 320 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC6A2P23975 617 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 KDELR1P24390 212 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 BST1Q10588 318 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 C6orf183Q5T699 404 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 DUPD1Q68J44 220 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 RASSF5Q8WWW0 418 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SOHLH2Q9NX45 425 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 XPR1Q9UBH6 696 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 OR10H1Q9Y4A9 318 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 PRR5-ARHGAP8B1AHC4 643 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 UGT2B17O75795 530 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 POMZP3Q6PJE2 187 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ADGRG2Q8IZP9 1017 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SYNPOQ8N3V7 929 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 OR52K2Q8NGK3 314 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 BAP1Q92560 729 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SMPD4Q9NXE4 827 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ASTN2O75129 1339 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SMCO3A2RU48 225 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 MCCD1P59942 119 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF234Q14588 700 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 PYHIN1Q6K0P9 492 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 GPRIN3Q6ZVF9 776 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 LINGO2Q7L985 606 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 DEFB106AQ8N104 65 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 CERKQ8TCT0 537 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNF606Q8WXB4 792 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SKA1Q96BD8 255 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 TMEM39BQ9GZU3 492 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 AGO4Q9HCK5 861 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 CKLFQ9UBR5 152 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ABCG2Q9UNQ0 655 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 RPTORQ8N122 1335 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 APOL3O95236 402 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ABL2P42684 1182 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 RAB10P61026 200 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 FSCN1Q16658 493 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 CNSTQ6PJW8 725 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 PQLC1Q8N2U9 271 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 SLC4A11Q8NBS3 891 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 PIK3R3Q92569 461 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 TNFRSF25Q93038 417 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ATG4CQ96DT6 458 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 QRFPRQ96P65 431 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 CHCHD6Q9BRQ6 235 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ZCCHC2Q9C0B9 1178 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 TAS2R14Q9NYV8 317 aa11.05□□□□□ -0.64
GTF3C1-201ENST00000356183 ZNHIT2Q9UHR6 403 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms