RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ANKFN1Q8N957 763 aa10.17□□□□□ -0.78
PTPRA-203ENST00000356147 DDHD1Q8NEL9 900 aa10.17□□□□□ -0.78
PTPRA-203ENST00000356147 FSD1LQ9BXM9 530 aa10.17□□□□□ -0.78
PTPRA-203ENST00000356147 DUSP16Q9BY84 665 aa10.17□□□□□ -0.78
PTPRA-203ENST00000356147 WDCPQ9H6R7 721 aa10.17□□□□□ -0.78
PTPRA-203ENST00000356147 MEAF6Q9HAF1 191 aa10.17□□□□□ -0.78
PTPRA-203ENST00000356147 VPS45Q9NRW7 570 aa10.17□□□□□ -0.78
PTPRA-203ENST00000356147 BRWD3Q6RI45 1802 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ZFC3H1O60293 1989 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 SMIM28A0A1B0GU29 152 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TOR1BO14657 336 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ARPC2O15144 300 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 COQ9O75208 318 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 BMP2P12643 396 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ADCYAP1R1P41586 468 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 DIO3P55073 304 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 NR1D2Q14995 579 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 MAPRE2Q15555 327 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PERM1Q5SV97 790 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 EGFLAMQ63HQ2 1017 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 DENND5AQ6IQ26 1287 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ANKRD26P1Q6NSI1 321 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TMEM207Q6UWW9 146 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 CROCCP3Q8IVE0 287 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 EXOC8Q8IYI6 725 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 HDAC11Q96DB2 347 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 C19orf60Q96EN9 201 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ZFP42Q96MM3 310 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 GPATCH1Q9BRR8 931 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ELP3Q9H9T3 547 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 FANCEQ9HB96 536 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PCDH12Q9NPG4 1184 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 CCM2LQ9NUG4 571 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 RBMX2Q9Y388 322 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TIMM22Q9Y584 194 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 MYBPHLA2RUH7 354 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PIP5K1BO14986 540 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ANGPT2O15123 496 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 IL10P22301 178 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PSMA4P25789 261 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 SH3BP2P78314 561 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ITKQ08881 620 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TRAP1Q12931 704 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 RPS6KA2Q15349 733 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 UGT3A2Q3SY77 523 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ANKRD34AQ69YU3 496 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PIWIL3Q7Z3Z3 882 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PPHLN1Q8NEY8 458 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ESAMQ96AP7 390 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TUBGCP3Q96CW5 907 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TEX37Q96LM6 180 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 COLEC11Q9BWP8 271 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ADNPQ9H2P0 1102 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 GSTO2Q9H4Y5 243 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 MID1IP1Q9NPA3 183 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ZNF232Q9UNY5 417 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PIN4Q9Y237 131 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 KCTD3Q9Y597 815 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 H3BRB1 525 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 NFKBIEO00221 500 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 STAU1O95793 577 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 MOCS2O96007 188 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 GPX3P22352 226 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 MYF6P23409 242 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PRKAA2P54646 552 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 CDKN2DP55273 166 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ARHGAP1Q07960 439 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 GALNT2Q10471 571 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TTLL4Q14679 1199 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 POLD3Q15054 466 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 ZBTB6Q15916 424 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 SLC36A3Q495N2 470 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 PAN2Q504Q3 1202 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 DHRS4L2Q6PKH6 230 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 LARP4Q71RC2 724 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■□□□□ 8.1
PTPRA-203ENST00000356147 ADGRG5Q8IZF4 528 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 DHRSXQ8N5I4 330 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 GFM2Q969S9 779 aaKnown RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 UHRF1Q96T88 793 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-203ENST00000356147 AGPAT4Q9NRZ5 378 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 TBC1D13Q9NVG8 400 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 EXD2Q9NVH0 621 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 FBXW11Q9UKB1 542 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 DNAJC15Q9Y5T4 150 aa10.16□□□□□ -0.78
PTPRA-203ENST00000356147 MEIS3P2A8K0S8 358 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 FAM155AB1AL88 458 aaPredicted RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 FXYD1O00168 92 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 ACOX3O15254 700 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 PORP16435 677 aaPredicted RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 IL7RP16871 459 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 AFF1P51825 1210 aaKnown RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 IST1P53990 364 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 SFSWAPQ12872 951 aaKnown RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 FRG1Q14331 258 aaKnown RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 UGP2Q16851 508 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 IMPG1Q17R60 797 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 NCCRP1Q6ZVX7 275 aaPredicted RBP10.15□□□□□ -0.78
PTPRA-203ENST00000356147 UTS2BQ765I0 119 aa10.15□□□□□ -0.78
PTPRA-203ENST00000356147 RALGPS2Q86X27 583 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms