RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 PSMD12O00232 456 aaPredicted RBP14.08□□□□□ -0.15
PGBD2-202ENST00000355360 CASQ2O14958 399 aaPredicted RBP14.08□□□□□ -0.15
PGBD2-202ENST00000355360 NPHS1O60500 1241 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.15
PGBD2-202ENST00000355360 CES1P23141 567 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 OR1E1P30953 314 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 LEPRP48357 1165 aaKnown RBP14.08□□□□□ -0.15
PGBD2-202ENST00000355360 RENBPP51606 427 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 SH3BP2P78314 561 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 TIAL1Q01085 375 aaKnown RBP eCLIP14.08□□□□□ -0.15
PGBD2-202ENST00000355360 TAF10Q12962 218 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 MBTPS1Q14703 1052 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 OR4D1Q15615 310 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 SLC39A13Q96H72 371 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 CCDC28BQ9BUN5 200 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 MRPL1Q9BYD6 325 aaKnown RBP14.08□□□□□ -0.15
PGBD2-202ENST00000355360 PRDM5Q9NQX1 630 aaPredicted RBP14.08□□□□□ -0.15
PGBD2-202ENST00000355360 VPS45Q9NRW7 570 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 IKZF3Q9UKT9 509 aa14.08□□□□□ -0.15
PGBD2-202ENST00000355360 PRRC2BQ5JSZ5 2229 aaKnown RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 CCDC162PA2VCL2 907 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 TSPAN3O60637 253 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 UGT1A6P19224 532 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 ZNF135P52742 658 aaPredicted RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 PRKCZQ05513 592 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 POLD3Q15054 466 aaPredicted RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 PLA2G4EQ3MJ16 856 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 RSPO2Q6UXX9 243 aaPredicted RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 ST13P4Q8IZP2 240 aaPredicted RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 GRIN3AQ8TCU5 1115 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 LINC01599Q8WXQ3 324 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 LPGAT1Q92604 370 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 FBXO32Q969P5 355 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 UBXN10Q96LJ8 280 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 TRIM4Q9C037 500 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 NMRK2Q9NPI5 230 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 GALPQ9UBC7 116 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 TLR6Q9Y2C9 796 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 AP3B1O00203 1094 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 ADAMTS4O75173 837 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 TADA2AO75478 443 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 RGRP47804 291 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 APLP1P51693 650 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 CHN2P52757 468 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 ZNF33AQ06730 810 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 CAPRIN1Q14444 709 aaKnown RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 GRB7Q14451 532 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 MGAT5BQ3V5L5 792 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 UNC50Q53HI1 259 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 VARS2Q5ST30 1063 aaKnown RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 PTGR2Q8N8N7 351 aaPredicted RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 OR7D4Q8NG98 312 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 SPATA16Q9BXB7 569 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 GPR62Q9BZJ7 368 aa14.08□□□□□ -0.16
PGBD2-202ENST00000355360 POLR3BQ9NW08 1133 aaPredicted RBP14.08□□□□□ -0.16
PGBD2-202ENST00000355360 TRPC5OSA6NMA1 111 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 AHCYL1O43865 530 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 TPST1O60507 370 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 BCAS2O75934 225 aaPredicted RBP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 SMIM18P0DKX4 95 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 FKBP1BP68106 108 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 MAPRE1Q15691 268 aaKnown RBP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 KIF19Q2TAC6 998 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 FAM171A1Q5VUB5 890 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 KLC3Q6P597 504 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 RETREG3Q86VR2 466 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 MON1AQ86VX9 555 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 DIS3LQ8TF46 1054 aaKnown RBP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 PRPF18Q99633 342 aaKnown RBP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 ZBED2Q9BTP6 218 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 GRIP2Q9C0E4 1043 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 EGFL7Q9UHF1 273 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 TIMM22Q9Y584 194 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 SNX13Q9Y5W8 968 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 SLCO1B7G3V0H7 640 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 NR5A2O00482 541 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 IGHA2P01877 340 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 CTXN3Q4LDR2 81 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 ZNF678Q5SXM1 525 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 RARS2Q5T160 578 aaKnown RBP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 ZNF598Q86UK7 904 aaKnown RBP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 FUNDC1Q8IVP5 155 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 DDIASQ8IXT1 998 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 UMODL1-AS1Q8N2C9 162 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 TRPC4APQ8TEL6 797 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 NUDT8Q8WV74 236 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 VCX3BQ9H321 246 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 ATP13A1Q9HD20 1204 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 MID1IP1Q9NPA3 183 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 MARCH2Q9P0N8 246 aa14.07□□□□□ -0.16
PGBD2-202ENST00000355360 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
PGBD2-202ENST00000355360 ZNF839A8K0R7 811 aa14.06□□□□□ -0.16
PGBD2-202ENST00000355360 MRASO14807 208 aa14.06□□□□□ -0.16
PGBD2-202ENST00000355360 RAMP2O60895 175 aa14.06□□□□□ -0.16
PGBD2-202ENST00000355360 LINC00032P0C843 101 aa14.06□□□□□ -0.16
PGBD2-202ENST00000355360 CKMT2P17540 419 aa14.06□□□□□ -0.16
PGBD2-202ENST00000355360 DNAJB2P25686 324 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms