RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 MTG2Q9H4K7 406 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 FBRSL1Q9HCM7 1045 aaKnown RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 IARS2Q9NSE4 1012 aaKnown RBP9.64□□□□□ -0.87
NPHP1-202ENST00000355301 TXNDC16Q9P2K2 825 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 IL36AQ9UHA7 158 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 ZNF711Q9Y462 761 aa9.64□□□□□ -0.87
NPHP1-202ENST00000355301 TSPAN11A1L157 253 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 HMX2A2RU54 273 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 FOXO6A8MYZ6 492 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 SPECC1L-ADORA2AF8WAN1 911 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 POLR3GO15318 223 aaPredicted RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 RPP40O75818 363 aaKnown RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 CTSLP07711 333 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 ALPIP09923 528 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 BMP1P13497 986 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 HNRNPLP14866 589 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 CTPS1P17812 591 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 HPDP32754 393 aaPredicted RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 HNF1BP35680 557 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 IL12RB1P42701 662 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 TNFRSF4P43489 277 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 PPP2R2AP63151 447 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 PRAMEP78395 509 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 THOC5Q13769 683 aaKnown RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 ENPP2Q13822 863 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 ELAVL3Q14576 367 aaKnown RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 PTPRRQ15256 657 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 E2F5Q15329 346 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 SMAD1Q15797 465 aaKnown RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 CDKN3Q16667 212 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 C9orf64Q5T6V5 341 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 GRTP1Q5TC63 336 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 NEPROQ6NW34 567 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 SERPINA13PQ6UXR4 307 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 KDM7AQ6ZMT4 941 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 KIAA0408Q6ZU52 694 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 STRA8Q7Z7C7 330 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 RALGPS2Q86X27 583 aaPredicted RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 LMNTD2Q8IXW0 634 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 SRRM1Q8IYB3 904 aaKnown RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 NDUFAF2Q8N183 169 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 PAF1Q8N7H5 531 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 OR4K2Q8NGD2 314 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 GABPB2Q8TAK5 448 aaPredicted RBP9.63□□□□□ -0.87
NPHP1-202ENST00000355301 GRIN3AQ8TCU5 1115 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 CALML6Q8TD86 181 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 PPM1EQ8WY54 764 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 CDKN2AIPNLQ96HQ2 116 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 TBATAQ96M53 351 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 KLHL32Q96NJ5 620 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 RBBP8Q99708 897 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 FAM167BQ9BTA0 163 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 MFSD1Q9H3U5 465 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 DKK3Q9UBP4 350 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 GGT7Q9UJ14 662 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 COL6A3P12111 3177 aa9.63□□□□□ -0.87
NPHP1-202ENST00000355301 A0A1W2PPM1 405 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 H7C0S8 307 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 K7EQS6 105 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 NPC1O15118 1278 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 BUD23O43709 281 aaKnown RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 ITGA2BP08514 1039 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 HLA-EP13747 358 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 HADHAP40939 763 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 CSE1LP55060 971 aaKnown RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 DNAJC3Q13217 504 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 PTPRCAPQ14761 206 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 UGP2Q16851 508 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 ZNF805Q5CZA5 627 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 EGFLAMQ63HQ2 1017 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 ZNF470Q6ECI4 717 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 TXNDC11Q6PKC3 985 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 TIFABQ6ZNK6 161 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 USP45Q70EL2 814 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 LYSMD3Q7Z3D4 306 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 GALNT7Q86SF2 657 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 ARFGAP2Q8N6H7 521 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 C2CD4AQ8NCU7 369 aaPredicted RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 TMIEQ8NEW7 156 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 OR6P1Q8NGX9 317 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 EID2BQ96D98 161 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 SGSM3Q96HU1 749 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 GPR63Q9BZJ6 419 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 C8orf33Q9H7E9 229 aaPredicted RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 ZFYVE1Q9HBF4 777 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 POLR3BQ9NW08 1133 aaPredicted RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 IL17CQ9P0M4 197 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 PPM1HQ9ULR3 514 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 TCF20Q9UGU0 1960 aaKnown RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 C1orf232A0A0U1RR37 186 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 CCDC162PA2VCL2 907 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 NPIPB15A6NHN6 443 aaPredicted RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 TRIM49D1C9J1S8 452 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 CCL22O00626 93 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 STX7O15400 261 aaKnown RBP9.62□□□□□ -0.87
NPHP1-202ENST00000355301 AHSGP02765 367 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 MT-ND3P03897 115 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 PRNPP04156 253 aa9.62□□□□□ -0.87
NPHP1-202ENST00000355301 BRAFP15056 766 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms