RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 C1orf21Q9H246 121 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 ATXN3LQ9H3M9 355 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 TASP1Q9H6P5 420 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 OLAHQ9NV23 265 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 HACD1B0YJ81 288 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.42□□□□□ -0.9
SMG6-202ENST00000354901 ICMTO60725 284 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 GPR32O75388 356 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 DARSP14868 501 aaKnown RBP9.42□□□□□ -0.9
SMG6-202ENST00000354901 SPRP35270 261 aaPredicted RBP9.42□□□□□ -0.9
SMG6-202ENST00000354901 IDUAP35475 653 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 HPCAL1P37235 193 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 BEX3Q00994 111 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 KLF10Q13118 480 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 TMEM198Q66K66 360 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 CLEC20AQ6ZU45 233 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 OTOP3Q7RTS5 596 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
SMG6-202ENST00000354901 GATAD2AQ86YP4 633 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 CHERPQ8IWX8 916 aaKnown RBP9.42□□□□□ -0.9
SMG6-202ENST00000354901 GOLM1Q8NBJ4 401 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 LILRB4Q8NHJ6 448 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 APBB2Q92870 758 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 BBS2Q9BXC9 721 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 DUSP16Q9BY84 665 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 ABCB10Q9NRK6 738 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 VPS45Q9NRW7 570 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 CPQQ9Y646 472 aa9.42□□□□□ -0.9
SMG6-202ENST00000354901 PIRO00625 290 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 B4GAT1O43505 415 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 SULT1C4O75897 302 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 TPPPO94811 219 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 CD4P01730 458 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 MLNP12872 115 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 NMBRP28336 390 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 ADRA1BP35368 520 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 FPGSQ05932 587 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 SELENBP1Q13228 472 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 CEACAM7Q14002 265 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 IKBKEQ14164 716 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 FSCBQ5H9T9 825 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 CCDC81Q6ZN84 652 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 KCNMB4Q86W47 210 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 PSTKQ8IV42 348 aaKnown RBP9.41□□□□□ -0.9
SMG6-202ENST00000354901 FAM20CQ8IXL6 584 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 SPATA22Q8NHS9 363 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 ACMSDQ8TDX5 336 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 MYBPHLA2RUH7 354 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 IDH3BO43837 385 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 CAPN1P07384 714 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 MLLT10P55197 1068 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 RPS3AP61247 264 aaKnown RBP9.41□□□□□ -0.9
SMG6-202ENST00000354901 SNX17Q15036 470 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 MOGQ16653 247 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 PITRM1Q5JRX3 1037 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 KIAA0319Q5VV43 1072 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 FAM91A1Q658Y4 838 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 IL31Q6EBC2 164 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 LRRC8EQ6NSJ5 796 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 PAQR9Q6ZVX9 377 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 CCNYL1Q8N7R7 359 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 TDRD5Q8NAT2 981 aaKnown RBP9.41□□□□□ -0.9
SMG6-202ENST00000354901 KYQ8NBH2 561 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 URGCPQ8TCY9 931 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 FIG4Q92562 907 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 OMA1Q96E52 524 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 DMRTB1Q96MA1 342 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 NPY6RQ99463 290 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 IL12RB2Q99665 862 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 RBBP8Q99708 897 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 CPNE1Q99829 537 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 CTRCQ99895 268 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 OMDQ99983 421 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 TOR3AQ9H497 397 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 TMEM30AQ9NV96 361 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 STK39Q9UEW8 545 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 NUDT5Q9UKK9 219 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 IPPQ9Y573 584 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 ZNF236Q9UL36 1845 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 DFFAO00273 331 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 DAB1O75553 588 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 MT-ND1P03886 318 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 NAGLUP54802 743 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 RACK1P63244 317 aaKnown RBP9.41□□□□□ -0.9
SMG6-202ENST00000354901 NFATC3Q12968 1075 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 POU6F1Q14863 301 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 PPP1R3AQ16821 1122 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 SV2CQ496J9 727 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 DUSP28Q4G0W2 176 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 FAM219BQ5XKK7 198 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 AKAP14Q86UN6 197 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 SLC22A16Q86VW1 577 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 MMAAQ8IVH4 418 aaKnown RBP9.41□□□□□ -0.9
SMG6-202ENST00000354901 PAF1Q8N7H5 531 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 OR7G1Q8NGA0 311 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 FAM110BQ8TC76 370 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 HASPINQ8TF76 798 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 TANKQ92844 425 aa9.41□□□□□ -0.9
SMG6-202ENST00000354901 LPPQ93052 612 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms