RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GDPD5Q8WTR4 605 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 CASD1Q96PB1 797 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 ASB2Q96Q27 587 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 PDFQ9HBH1 243 aa22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 MRPL40Q9NQ50 206 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 SPATS2LQ9NUQ6 558 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 MARCH4Q9P2E8 410 aaPredicted RBP22.32■■□□□ 1.16
NKX2-1-201ENST00000354822 TCAF2A6NFQ2 919 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 H3BNX3 289 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 SMIM24O75264 130 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 CD1EP15812 388 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 FDXRP22570 491 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 ME2P23368 584 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 SQLEQ14534 574 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 GPR158Q5T848 1215 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 FUT10Q6P4F1 479 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 BLOC1S5Q8TDH9 187 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 PHF21BQ96EK2 531 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 CEP295NLQ96MC4 621 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 CCSER2Q9H7U1 834 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 TRAF6Q9Y4K3 522 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 KCTD3Q9Y597 815 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 UBDO15205 165 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 GOT2P00505 430 aaKnown RBP22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 ENO3P13929 434 aaPredicted RBP22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 SELPP16109 830 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 OGNP20774 298 aaKnown RBP22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 TMEM207Q6UWW9 146 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 ANKS3Q6ZW76 656 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 LDB1Q86U70 411 aaPredicted RBP22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 TMEM126BQ8IUX1 230 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 LGI2Q8N0V4 545 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 SLAIN1Q8ND83 568 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 B3GALT6Q96L58 329 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 CRISPLD1Q9H336 500 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 ALG9Q9H6U8 611 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 MARCH5Q9NX47 278 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 PDP2Q9P2J9 529 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 DNMT3LQ9UJW3 386 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 CRYL1Q9Y2S2 319 aa22.31■■□□□ 1.16
NKX2-1-201ENST00000354822 GPC4O75487 556 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 NDST3O95803 873 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 PAX7P23759 505 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 SUOXP51687 545 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 DUSP4Q13115 394 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 FLOT2Q14254 428 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 DLG3Q92796 817 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 MARK4Q96L34 752 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 TTLL2Q9BWV7 592 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 GSTO2Q9H4Y5 243 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 SEPT3Q9UH03 358 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 PHF24Q9UPV7 400 aa22.3■■□□□ 1.16
NKX2-1-201ENST00000354822 SLC38A8A6NNN8 435 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 CFLARO15519 480 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 ACSL4O60488 711 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 SKAP2O75563 359 aaPredicted RBP22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 VNN2O95498 520 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 ATP5C1P36542 298 aaKnown RBP22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 SLC11A1P49279 550 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 THOP1P52888 689 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 TRIP10Q15642 601 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 ZNF678Q5SXM1 525 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 OR4L1Q8NH43 312 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 DNAJC1Q96KC8 554 aaKnown RBP22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 SUDS3Q9H7L9 328 aaPredicted RBP22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 CATSPERZQ9NTU4 200 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 ARL5AQ9Y689 179 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 OR51F1A6NGY5 319 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 CCL22O00626 93 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 MUSKO15146 869 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 CRTAMO95727 393 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 PLK1P53350 603 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 CDH4P55283 916 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 GNA12Q03113 381 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 LPCAT4Q643R3 524 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 OR52E8Q6IFG1 317 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 RSPO2Q6UXX9 243 aaPredicted RBP22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 PQLC1Q8N2U9 271 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 MGME1Q9BQP7 344 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 TMEM175Q9BSA9 504 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 LRFN2Q9ULH4 789 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 FIS1Q9Y3D6 152 aa22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 ARIH1Q9Y4X5 557 aaPredicted RBP22.29■■□□□ 1.16
NKX2-1-201ENST00000354822 CCDC162PA2VCL2 907 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 HOXA2O43364 376 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 SUPT7LO94864 414 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 CD1DP15813 335 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 SLC11A2P49281 568 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 HERVK_113P63132 956 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 RAB44Q7Z6P3 723 aaPredicted RBP22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 RHEBL1Q8TAI7 183 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 MYEOVQ96EZ4 313 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 ERVK-6Q9BXR3 956 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 INTS10Q9NVR2 710 aaKnown RBP22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 HACD3Q9P035 362 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 LYNP07948 512 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 UQCRBP14927 111 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 CES1P23141 567 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 PMLP29590 882 aa22.28■■□□□ 1.16
NKX2-1-201ENST00000354822 KCNQ1P51787 676 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms