RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SLC30A1Q9Y6M5 507 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 POGZQ7Z3K3 1410 aa1.69□□□□□ -2.14
BRCA1-202ENST00000354071 A0A0A6YYC8 382 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TCRBV5S1A1TA0A578 114 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 I3L1I5 382 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KERAO60938 352 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 IPO7O95373 1038 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 HLA-DOAP06340 250 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 OR52Z1P0C646 297 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TCF4P15884 667 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CFPP27918 469 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 RPS19P39019 145 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 RABIFP47224 123 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 EPHB4P54760 987 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ADPRHP54922 357 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 RALGDSQ12967 914 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 LAMB3Q13751 1172 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KCNA10Q16322 511 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SPDYAQ5MJ70 313 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PARS2Q7L3T8 475 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TUSC5Q8IXB3 177 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 LINC01465Q8N7H1 131 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TC2NQ8N9U0 490 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SPC24Q8NBT2 197 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 HMGCLL1Q8TB92 370 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ERGIC1Q969X5 290 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 RSPRY1Q96DX4 576 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF419Q96HQ0 510 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KATNB1Q9BVA0 655 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CADM1Q9BY67 442 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 WDR11Q9BZH6 1224 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PPIL3Q9H2H8 161 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ERVMER34-1Q9H9K5 563 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 GALNT9Q9HCQ5 603 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ARHGEF3Q9NR81 526 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SLC9A2Q9UBY0 812 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 RASAL2Q9UJF2 1139 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 HECW1Q76N89 1606 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SLC22A23A1A5C7 686 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 A6NL46 340 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 STRNO43815 780 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 VEGFDO43915 354 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 HS6ST1O60243 411 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KLK8O60259 260 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CYC1P08574 325 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 QDPRP09417 244 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PCP11498 1178 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 HOXB9P17482 250 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KLRC2P26717 231 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 MCM7P33993 719 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 NME5P56597 212 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DGCR2P98153 550 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ALCAMQ13740 583 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 R3HDM1Q15032 1099 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PGM5Q15124 567 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 GSTA3Q16772 222 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 NAA35Q5VZE5 725 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ATG9BQ674R7 924 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF474Q6S9Z5 364 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PEG10Q86TG7 708 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ADIPOR2Q86V24 386 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ARL14EPQ8N8R7 260 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 UTP15Q8TED0 518 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PTPMT1Q8WUK0 201 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 IGSF8Q969P0 613 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ST6GALNAC6Q969X2 333 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ARHGEF26Q96DR7 871 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF830Q96NB3 372 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 NEK1Q96PY6 1258 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ADOQ96SZ5 270 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PKP4Q99569 1192 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 AIFM2Q9BRQ8 373 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 AAMDCQ9H7C9 122 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 MORF4L1Q9UBU8 362 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ST6GALNAC2Q9UJ37 374 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 PA2G4Q9UQ80 394 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 B3GALT5Q9Y2C3 310 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 BLMP54132 1417 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ARHGEF17Q96PE2 2063 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 LRRC53A6NM62 1247 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 KLRF2D3W0D1 207 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DNM1LO00429 736 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SRPRAP08240 638 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DLDP09622 509 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC175P0C221 793 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 COMTP21964 271 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 MMP8P22894 467 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DUSP1P28562 367 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TPTEP56180 551 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 SPOCK1Q08629 439 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 RCN2Q14257 317 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 DRAP1Q14919 205 aaPredicted RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 TNIP1Q15025 636 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ATP13A5Q4VNC0 1218 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 FAM171A1Q5VUB5 890 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 CES5AQ6NT32 575 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 ANKRD54Q6NXT1 300 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 IL20RBQ6UXL0 311 aa1.68□□□□□ -2.14
BRCA1-202ENST00000354071 RBPMS2Q6ZRY4 209 aaKnown RBP1.68□□□□□ -2.14
BRCA1-202ENST00000354071 MCM10Q7L590 875 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms