RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SPATA17Q96L03 361 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SIGLEC10Q96LC7 697 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 MAGEB18Q96M61 343 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 TSGA13Q96PP4 275 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SMC6Q96SB8 1091 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 ZMYND15Q9H091 742 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 TKTL2Q9H0I9 626 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 GBA3Q9H227 469 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 CD248Q9HCU0 757 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 TMPRSS4Q9NRS4 437 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 MKS1Q9NXB0 559 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 COX16Q9P0S2 106 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 ZC3H7BQ9UGR2 993 aaKnown RBP8.32□□□□□ -1.08
CD44-205ENST00000352818 TBK1Q9UHD2 729 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 TRHDEQ9UKU6 1024 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 MAFFQ9ULX9 164 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 RRP15Q9Y3B9 282 aaKnown RBP8.32□□□□□ -1.08
CD44-205ENST00000352818 PCDHB5Q9Y5E4 795 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 SLCO1B1Q9Y6L6 691 aa8.32□□□□□ -1.08
CD44-205ENST00000352818 HIVEP1P15822 2718 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 FAM159BA6NKW6 160 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 H7C4K7 107 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 AP3B1O00203 1094 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 CACNG3O60359 315 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 LRIG2O94898 1065 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 RTN3O95197 1032 aaPredicted RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 CPP00450 1065 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 OAS1P00973 400 aaKnown RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 SLC2A3P11169 496 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 CREB1P16220 341 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 KRT15P19012 456 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 CNTFP26441 200 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 GARSP41250 739 aaKnown RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 KIR2DL1P43626 348 aaPredicted RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 PSEN1P49768 467 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 SERPINB9P50453 376 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 UCNP55089 124 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 MRPS21P82921 87 aaKnown RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 SLC18A2Q05940 514 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 AP1B1Q10567 949 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 IFRD2Q12894 506 aaPredicted RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 MTA1Q13330 715 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 MPP2Q14168 576 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 EFTUD2Q15029 972 aaKnown RBP eCLIP8.31□□□□□ -1.08
CD44-205ENST00000352818 PDGFRLQ15198 375 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 QPCTQ16769 361 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 CTXN3Q4LDR2 81 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 HP1BP3Q5SSJ5 553 aaPredicted RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 FAXCQ5TGI0 409 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 HES3Q5TGS1 186 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 ARMC3Q5W041 872 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 NUGGCQ68CJ6 796 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 ITPRIPL1Q6GPH6 555 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 FBXL19Q6PCT2 694 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 SLC36A4Q6YBV0 504 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 UNC5AQ6ZN44 842 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 CAPN12Q6ZSI9 719 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 PIGWQ7Z7B1 504 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 CPLX4Q7Z7G2 160 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 LRRC34Q8IZ02 419 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 ZNF567Q8N184 647 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 NUP93Q8N1F7 819 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 NPWQ8N729 165 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 ZNF248Q8NDW4 579 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 C1orf216Q8TAB5 229 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 SCAMP5Q8TAC9 235 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 DYDC1Q8WWB3 177 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 DNASE2BQ8WZ79 361 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 FATE1Q969F0 183 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 GRAMD1AQ96CP6 724 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 TBC1D31Q96DN5 1066 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 MTBPQ96DY7 904 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 SLC39A13Q96H72 371 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 C1orf74Q96LT6 269 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 PGLYRP2Q96PD5 576 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 PPP1R2P1Q96PQ5 205 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 PHF12Q96QT6 1004 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 LINC00597Q9H2U6 94 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 CATSPERBQ9H7T0 1116 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 PLAC1Q9HBJ0 212 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 KCNK9Q9NPC2 374 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 OLA1Q9NTK5 396 aaKnown RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 SAMD15Q9P1V8 674 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 PLEKHB1Q9UF11 243 aaPredicted RBP8.31□□□□□ -1.08
CD44-205ENST00000352818 OR12D3Q9UGF7 316 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 HCN2Q9UL51 889 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 TLR6Q9Y2C9 796 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 WNT6Q9Y6F9 365 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 FAM169AQ9Y6X4 670 aa8.31□□□□□ -1.08
CD44-205ENST00000352818 SPG11Q96JI7 2443 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 MTMR11A4FU01 709 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 SDR42E2A6NKP2 422 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 KCNU1A8MYU2 1149 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 K7ENP7 123 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 PSMD3O43242 534 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 AVILO75366 819 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 KIAA0754O94854 1291 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 AP2A1O95782 977 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 INHBAP08476 426 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms