RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ODC1P11926 461 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 CDKN2DP55273 166 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 UGT3A2Q3SY77 523 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 UNC50Q53HI1 259 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 NHSL2Q5HYW2 709 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 LRRC49Q8IUZ0 686 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 FIBCD1Q8N539 461 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 PNPLA1Q8N8W4 532 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 CASP10Q92851 521 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 IMP4Q96G21 291 aaKnown RBP24.59■■□□□ 1.53
CPNE1-202ENST00000352393 C3orf30Q96M34 536 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 UPF3AQ9H1J1 476 aaKnown RBP24.59■■□□□ 1.53
CPNE1-202ENST00000352393 SFMBT1Q9UHJ3 866 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 CCL15-CCL14A0A0B4J2E2 113 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 ATP6AP2A0A1C7CYW4 349 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 E9PAM4 449 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 PLOD2O00469 737 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 HNRNPRO43390 633 aaKnown RBP24.59■■□□□ 1.53
CPNE1-202ENST00000352393 ATP6AP2O75787 350 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 MYL3P08590 195 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 HSPA8P11142 646 aaKnown RBP24.59■■□□□ 1.53
CPNE1-202ENST00000352393 NELFEP18615 380 aaKnown RBP24.59■■□□□ 1.53
CPNE1-202ENST00000352393 KCNC1P48547 511 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 SCNN1GP51170 649 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 STX1BP61266 288 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 TUBA4AP68366 448 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 CCL15Q16663 113 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 UPP1Q16831 310 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 KRT80Q6KB66 452 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 ISCA2Q86U28 154 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 TRIML2Q8N7C3 387 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 HM13Q8TCT9 377 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 NOL6Q9H6R4 1146 aaKnown RBP24.59■■□□□ 1.53
CPNE1-202ENST00000352393 SPON1Q9HCB6 807 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 ABCC13Q9NSE7 274 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 ABCD2Q9UBJ2 740 aa24.59■■□□□ 1.53
CPNE1-202ENST00000352393 ARL5CA6NH57 179 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 SLC7A4O43246 635 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 TSPAN8P19075 237 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 RPL9P32969 192 aaKnown RBP24.58■■□□□ 1.53
CPNE1-202ENST00000352393 CDK9P50750 372 aaKnown RBP24.58■■□□□ 1.53
CPNE1-202ENST00000352393 GPR158Q5T848 1215 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 C14orf80Q86SX3 495 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 CANT1Q8WVQ1 401 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 BRI3BPQ8WY22 251 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 CAAP1Q9H8G2 361 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 MPP6Q9NZW5 540 aa24.58■■□□□ 1.53
CPNE1-202ENST00000352393 SOCS2O14508 198 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 SUPT7LO94864 414 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 CKMT2P17540 419 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 PGFP49763 221 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 NRG1Q02297 640 aaPredicted RBP24.58■■□□□ 1.52
CPNE1-202ENST00000352393 PITRM1Q5JRX3 1037 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 ZBTB49Q6ZSB9 765 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 PCYOX1LQ8NBM8 494 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 FAM110BQ8TC76 370 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 GRIN3AQ8TCU5 1115 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 ZC3H15Q8WU90 426 aaKnown RBP24.58■■□□□ 1.52
CPNE1-202ENST00000352393 GAB3Q8WWW8 586 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 ZUFSPQ96AP4 578 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 TMIGD2Q96BF3 282 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 TCF12Q99081 682 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 MFSD1Q9H3U5 465 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 HS3ST4Q9Y661 456 aa24.58■■□□□ 1.52
CPNE1-202ENST00000352393 WASH4PA8MWX3 477 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 NME4O00746 187 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 STAMBPO95630 424 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 S1PR4O95977 384 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 GRIA3P42263 894 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 HERVK_113P63132 956 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 PRKCQQ04759 706 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 TFAP2CQ92754 450 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 PPWD1Q96BP3 646 aaKnown RBP24.57■■□□□ 1.52
CPNE1-202ENST00000352393 ERVK-6Q9BXR3 956 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 PREBQ9HCU5 417 aa24.57■■□□□ 1.52
CPNE1-202ENST00000352393 MROH6A6NGR9 719 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 CYP11A1P05108 521 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 MAP7D1Q3KQU3 841 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 USP50Q70EL3 339 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-202ENST00000352393 ANKRD23Q86SG2 305 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 PIM3Q86V86 326 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 PACRGLQ8N7B6 248 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 MFSD2AQ8NA29 543 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 SH3RF2Q8TEC5 729 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 PTERQ96BW5 349 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 AKTIPQ9H8T0 292 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 CCM2LQ9NUG4 571 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-202ENST00000352393 POLR3BQ9NW08 1133 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-202ENST00000352393 FNIP2Q9P278 1114 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 MARCH4Q9P2E8 410 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-202ENST00000352393 CPT1AP50416 773 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 ARSDP51689 593 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 NDST2P52849 883 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 BEX3Q00994 111 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 IRF5Q13568 498 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 AGMOQ6ZNB7 445 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 LDB1Q86U70 411 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-202ENST00000352393 LRRTM3Q86VH5 581 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 ERI1Q8IV48 349 aaKnown RBP24.56■■□□□ 1.52
CPNE1-202ENST00000352393 CLYBLQ8N0X4 340 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms