RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ERO1BQ86YB8 467 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 PELI3Q8N2H9 469 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 SVOPQ8N4V2 548 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 GALNT6Q8NCL4 622 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 AIFM2Q9BRQ8 373 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 TRIM8Q9BZR9 551 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 TASP1Q9H6P5 420 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 PDE10AQ9Y233 779 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 FOCADQ5VW36 1801 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 ANKRD12Q6UB98 2062 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 ZNF99A8MXY4 864 aaPredicted RBP13.29□□□□□ -0.28
IFT88-202ENST00000351808 SHMT1P34896 483 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
IFT88-202ENST00000351808 SOX10P56693 466 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 BCAR1P56945 870 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 C6orf141Q5SZD1 244 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 HID1Q8IV36 788 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 SYTL1Q8IYJ3 562 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 ACVR1CQ8NER5 493 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 MCFD2Q8NI22 146 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 URGCPQ8TCY9 931 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 ST6GAL2Q96JF0 529 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 RNF157Q96PX1 679 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 CPXM1Q96SM3 734 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 CEP41Q9BYV8 373 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 TRIM15Q9C019 465 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 C8orf4Q9NR00 106 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 MAT2BQ9NZL9 334 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 HMGXB4Q9UGU5 601 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 CNTN6Q9UQ52 1028 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 MAGED1Q9Y5V3 778 aaPredicted RBP13.29□□□□□ -0.28
IFT88-202ENST00000351808 H3BUI4 141 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 CHRNA1P02708 482 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 PRKACAP17612 351 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 HK2P52789 917 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 TPD52P55327 224 aaPredicted RBP13.28□□□□□ -0.28
IFT88-202ENST00000351808 NXNL2Q5VZ03 156 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 FAM45BPQ6NSW5 357 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 STRA8Q7Z7C7 330 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 ADAMTSL2Q86TH1 951 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 NLGN4XQ8N0W4 816 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 FAM45AQ8TCE6 357 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 TFAP2BQ92481 460 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 ELMO1Q92556 727 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 REXO4Q9GZR2 422 aaKnown RBP13.28□□□□□ -0.28
IFT88-202ENST00000351808 SYTL2Q9HCH5 934 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 NECTIN3Q9NQS3 549 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 GPATCH2LQ9NWQ4 482 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 IRS2Q9Y4H2 1338 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 UBDO15205 165 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 TSPAN1O60635 241 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 SCO1O75880 301 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 LSM8O95777 96 aaKnown RBP13.28□□□□□ -0.28
IFT88-202ENST00000351808 LDLRP01130 860 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 GSTM1P09488 218 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 GFAPP14136 432 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 ALOX12P18054 663 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 TPSB2P20231 275 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 PCMT1P22061 227 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 ACTR2P61160 394 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 TPSAB1Q15661 275 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 FAM219BQ5XKK7 198 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 C8orf82Q6P1X6 216 aaPredicted RBP13.28□□□□□ -0.28
IFT88-202ENST00000351808 CLEC14AQ86T13 490 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 IFNEQ86WN2 208 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
IFT88-202ENST00000351808 SPPL2BQ8TCT7 592 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 ARNTL2Q8WYA1 636 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 HDAC2Q92769 488 aaKnown RBP13.28□□□□□ -0.28
IFT88-202ENST00000351808 SCYL1Q96KG9 808 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 C8orf48Q96LL4 319 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 NODALQ96S42 347 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 SEPHS2Q99611 448 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 ASPSCR1Q9BZE9 553 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 HOXC10Q9NYD6 342 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 RWDD3Q9Y3V2 267 aa13.28□□□□□ -0.28
IFT88-202ENST00000351808 ENPP3O14638 875 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 ARPC2O15144 300 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 TRIM16O95361 564 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 MT-CO1P00395 513 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 SBK3P0C264 359 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 CCDC159P0C7I6 412 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 SAT1P21673 171 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 MAGEA12P43365 314 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 EIF2B5Q13144 721 aaKnown RBP13.27□□□□□ -0.28
IFT88-202ENST00000351808 SQLEQ14534 574 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 PYCR3Q53H96 274 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 YIF1BQ5BJH7 314 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 GRTP1Q5TC63 336 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 TAF2Q6P1X5 1199 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 B3GNT9Q6UX72 402 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 ZYG11AQ6WRX3 759 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 RETREG3Q86VR2 466 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 C8orf59Q8N0T1 100 aaPredicted RBP13.27□□□□□ -0.28
IFT88-202ENST00000351808 CHDHQ8NE62 594 aaPredicted RBP13.27□□□□□ -0.28
IFT88-202ENST00000351808 SLC7A14Q8TBB6 771 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 SLC25A23Q9BV35 468 aa13.27□□□□□ -0.28
IFT88-202ENST00000351808 IL22Q9GZX6 179 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms