RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 STX7O15400 261 aaKnown RBP18.71■□□□□ 0.59
PTN-201ENST00000348225 GOT2P00505 430 aaKnown RBP18.71■□□□□ 0.59
PTN-201ENST00000348225 TRBC1P01850 177 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 SLC4A1P02730 911 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 PSMC3P17980 439 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 LEPRP48357 1165 aaKnown RBP18.71■□□□□ 0.59
PTN-201ENST00000348225 SEC24CP53992 1094 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 EIF4HQ15056 248 aaKnown RBP18.71■□□□□ 0.59
PTN-201ENST00000348225 DPY19L3Q6ZPD9 716 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 Q6ZVU0 165 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 GPR150Q8NGU9 434 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 OR4L1Q8NH43 312 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 CDKN2AIPNLQ96HQ2 116 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 GPR63Q9BZJ6 419 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 SUV39H2Q9H5I1 410 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 ZDHHC6Q9H6R6 413 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 CATSPERZQ9NTU4 200 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 POLR3BQ9NW08 1133 aaPredicted RBP18.71■□□□□ 0.59
PTN-201ENST00000348225 SLC17A7Q9P2U7 560 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 DCDC2Q9UHG0 476 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 MTCH2Q9Y6C9 303 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 CCL22O00626 93 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 CD3EAPO15446 510 aaKnown RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 FAM107AO95990 144 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 LAMP2P13473 410 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 CTPS1P17812 591 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 OGNP20774 298 aaKnown RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 GABRB3P28472 473 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 ABCG1P45844 678 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 CLCN5P51795 746 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 DLX2Q07687 328 aaPredicted RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 RUNX3Q13761 415 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 PDE1CQ14123 709 aaPredicted RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 PTPRCAPQ14761 206 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 LRIT3Q3SXY7 679 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 SDCCAG8Q86SQ7 713 aaPredicted RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 TTC30BQ8N4P2 665 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 SCG3Q8WXD2 468 aaKnown RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 NECTIN4Q96NY8 510 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 FAM111AQ96PZ2 611 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 NSRP1Q9H0G5 558 aaKnown RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 FBXO6Q9NRD1 293 aaPredicted RBP18.71■□□□□ 0.58
PTN-201ENST00000348225 ELOVL2Q9NXB9 296 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 GRID1Q9ULK0 1009 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 PHTF1Q9UMS5 762 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 PLLPQ9Y342 182 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 PKP3Q9Y446 797 aa18.71■□□□□ 0.58
PTN-201ENST00000348225 KIAA1549LQ6ZVL6 1849 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 FAM95CA0A1B0GW59 222 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 CAPN8A6NHC0 703 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 NDUFAB1O14561 156 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 VIMP08670 466 aaKnown RBP18.7■□□□□ 0.58
PTN-201ENST00000348225 F7P08709 466 aaPredicted RBP18.7■□□□□ 0.58
PTN-201ENST00000348225 GRM2Q14416 872 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 USP10Q14694 798 aaKnown RBP18.7■□□□□ 0.58
PTN-201ENST00000348225 PDK4Q16654 411 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 INSCQ1MX18 579 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 GAB4Q2WGN9 574 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 KYAT3Q6YP21 454 aaKnown RBP18.7■□□□□ 0.58
PTN-201ENST00000348225 CMC1Q7Z7K0 106 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 ST13P5Q8NFI4 369 aaPredicted RBP18.7■□□□□ 0.58
PTN-201ENST00000348225 OR2A12Q8NGT7 310 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 FRS2Q8WU20 508 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 SORCS1Q8WY21 1168 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 ECHDC3Q96DC8 303 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 ZNF317Q96PQ6 595 aaPredicted RBP18.7■□□□□ 0.58
PTN-201ENST00000348225 SMIM14Q96QK8 99 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 C19orf43Q9BQ61 176 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 KXD1Q9BQD3 176 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 VPS11Q9H270 941 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 SUDS3Q9H7L9 328 aaPredicted RBP18.7■□□□□ 0.58
PTN-201ENST00000348225 SLC39A10Q9ULF5 831 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 PLA2G4CQ9UP65 541 aa18.7■□□□□ 0.58
PTN-201ENST00000348225 A0A096LPK6 155 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 OR51F1A6NGY5 319 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 OTOL1A6NHN0 477 aaPredicted RBP18.69■□□□□ 0.58
PTN-201ENST00000348225 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.69■□□□□ 0.58
PTN-201ENST00000348225 ECI2O75521 394 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 GSTA1P08263 222 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 ALPIP09923 528 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 ETV4P43268 484 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 SLC6A11P48066 632 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 PTPRNQ16849 979 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 FASTKD1Q53R41 847 aaKnown RBP18.69■□□□□ 0.58
PTN-201ENST00000348225 TAF1BQ53T94 588 aaPredicted RBP18.69■□□□□ 0.58
PTN-201ENST00000348225 CDHR3Q6ZTQ4 885 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 USP45Q70EL2 814 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 MTSS1LQ765P7 747 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 KDM1BQ8NB78 822 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 CCT8L2Q96SF2 557 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 HEPHQ9BQS7 1158 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 POMKQ9H5K3 350 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 TLK1Q9UKI8 766 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 CORO1CQ9ULV4 474 aaPredicted RBP18.69■□□□□ 0.58
PTN-201ENST00000348225 ANKRD6Q9Y2G4 727 aa18.69■□□□□ 0.58
PTN-201ENST00000348225 COL4A3Q01955 1670 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 A0A1W2PPC1 479 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 TTC34A8MYJ7 566 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 TCP11X1B4DZS4 312 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 H7C0S8 307 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms