RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PRAMEF26H0Y7S4 382 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 PSMD11O00231 422 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 ZNF185O15231 689 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 BCAT2O15382 392 aaPredicted RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 SLC31A1O15431 190 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 FZD6O60353 706 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 PHF2O75151 1096 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 MT-CYBP00156 380 aaPredicted RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 TRBC1P01850 177 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 IGHV4-34P06331 123 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 PDHA1P08559 390 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 ZNF30P17039 623 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 HLA-DPA1P20036 260 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 PSMB4P28070 264 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 MAT2AP31153 395 aaKnown RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 VIPR1P32241 457 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 COILP38432 576 aaPredicted RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 MMP12P39900 470 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 ABL2P42684 1182 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 LIG3P49916 1009 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 TUBB2AQ13885 445 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 CYP1B1Q16678 543 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 CCDC137Q6PK04 289 aaKnown RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 KDELC2Q7Z4H8 507 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 LINC00523Q86TU6 105 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 ZSWIM9Q86XI8 627 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 CREG2Q8IUH2 290 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 SLC41A1Q8IVJ1 513 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 IPMKQ8NFU5 416 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 TADA1Q96BN2 335 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 SERAC1Q96JX3 654 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 MCCC1Q96RQ3 725 aaPredicted RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 WRAP53Q9BUR4 548 aaKnown RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 TUBB2BQ9BVA1 445 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 C1QTNF2Q9BXJ5 285 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 NUSAP1Q9BXS6 441 aaKnown RBP11.88□□□□□ -0.51
SNCA-202ENST00000345009 ARRDC1-AS1Q9H2J1 176 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 HACD3Q9P035 362 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 B4GALT6Q9UBX8 382 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 RAPGEFL1Q9UHV5 662 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 EML5Q05BV3 1969 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 LOC285095A0A1B0GVY8 99 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 CCDC188H7C350 402 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 KHNYNO15037 678 aaKnown RBP11.87□□□□□ -0.51
SNCA-202ENST00000345009 MMP20O60882 483 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 PAK4O96013 591 aaPredicted RBP11.87□□□□□ -0.51
SNCA-202ENST00000345009 PRLP01236 227 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 FGF1P05230 155 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 CTPS1P17812 591 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 HNRNPA2B1P22626 353 aaKnown RBP11.87□□□□□ -0.51
SNCA-202ENST00000345009 MAOBP27338 520 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 HNF1BP35680 557 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 MPLP40238 635 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 KCNJ1P48048 391 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 GDF10P55107 478 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 PPP2CBP62714 309 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 PPP2CAP67775 309 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 OVGP1Q12889 678 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 ACOX1Q15067 660 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 ZNF284Q2VY69 593 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 TMEM259Q4ZIN3 620 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 LRRC73Q5JTD7 316 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 NAPEPLDQ6IQ20 393 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 RAVER1Q8IY67 606 aaKnown RBP11.87□□□□□ -0.51
SNCA-202ENST00000345009 KIF18AQ8NI77 898 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 ZNF592Q92610 1267 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 OXNAD1Q96HP4 312 aaPredicted RBP11.87□□□□□ -0.51
SNCA-202ENST00000345009 NSMCE3Q96MG7 304 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 LENG8Q96PV6 779 aaPredicted RBP11.87□□□□□ -0.51
SNCA-202ENST00000345009 TRABDQ9H4I3 376 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 LRRC40Q9H9A6 602 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 MAGEE1Q9HCI5 957 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 AASDHPPTQ9NRN7 309 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 RAD18Q9NS91 495 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 ITM2BQ9Y287 266 aa11.87□□□□□ -0.51
SNCA-202ENST00000345009 PI4KAP42356 2102 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 C1orf232A0A0U1RR37 186 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 RGSL1A5PLK6 1076 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 CAPN8A6NHC0 703 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 A8MX80 341 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 F5H423 210 aaPredicted RBP11.86□□□□□ -0.51
SNCA-202ENST00000345009 AP3B1O00203 1094 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 TOR1BO14657 336 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 FPGTO14772 594 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 HEXIM1O94992 359 aaKnown RBP11.86□□□□□ -0.51
SNCA-202ENST00000345009 ECEL1O95672 775 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 PRKCGP05129 697 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 CFIP05156 583 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 SYPP08247 313 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 C21orf59P57076 290 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 SARNPP82979 210 aaKnown RBP11.86□□□□□ -0.51
SNCA-202ENST00000345009 CKAP4Q07065 602 aaKnown RBP11.86□□□□□ -0.51
SNCA-202ENST00000345009 LRRC14Q15048 493 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 PPP1R7Q15435 360 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 SLC1A5Q15758 541 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 QPCTQ16769 361 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 SEL1L3Q68CR1 1132 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 KDELC1Q6UW63 502 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms