RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 APOOQ9BUR5 198 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 CLPBQ9H078 707 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 OR1A2Q9Y585 309 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 ZFC3H1O60293 1989 aaKnown RBP14.47□□□□□ -0.09
HMGN3-202ENST00000344726 KIF26BQ2KJY2 2108 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 URB1O60287 2271 aaKnown RBP14.47□□□□□ -0.09
HMGN3-202ENST00000344726 A0A0U1RQS6 177 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 H3BM21 787 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 TOR1BO14657 336 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 PGLSO95336 258 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 HLA-DQB2P05538 268 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 CDK4P11802 303 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 COMTP21964 271 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 LHCGRP22888 699 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 CCNCP24863 283 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 HNF1BP35680 557 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 DSC2Q02487 901 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 CNGA3Q16281 694 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 RALGPS1Q5JS13 557 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 CDCP2Q5VXM1 449 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 SLC9A4Q6AI14 798 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.47□□□□□ -0.09
HMGN3-202ENST00000344726 PIH1D2Q8WWB5 315 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 FATE1Q969F0 183 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 MRFAP1L1Q96HT8 127 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 COQ10AQ96MF6 247 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 GOLPH3Q9H4A6 298 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 RBM22Q9NW64 420 aaKnown RBP eCLIP14.47□□□□□ -0.09
HMGN3-202ENST00000344726 APOBEC3BQ9UH17 382 aaKnown RBP14.47□□□□□ -0.09
HMGN3-202ENST00000344726 PCDHB1Q9Y5F3 818 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 CSNK1G3Q9Y6M4 447 aa14.47□□□□□ -0.09
HMGN3-202ENST00000344726 NEMP2A6NFY4 417 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 NPIPB15A6NHN6 443 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 ZNF487B1APH4 448 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 TLX3O43711 291 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 FZD6O60353 706 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 MT-CO3P00414 261 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 KRT1P04264 644 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 ALPPL2P10696 532 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 TNNT1P13805 278 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 CCNB1P14635 433 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 VIPR1P32241 457 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 MAGEA1P43355 309 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 PEX5P50542 639 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 HADHBP55084 474 aaKnown RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 ITKQ08881 620 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 NIPAL4Q0D2K0 466 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 MTM1Q13496 603 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 NFATC4Q14934 902 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 TCEA2Q15560 299 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 CDKN3Q16667 212 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 ALG11Q2TAA5 492 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 PRRT3Q5FWE3 981 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 LRRC38Q5VT99 294 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 TIGD7Q6NT04 549 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 ZCCHC8Q6NZY4 707 aaKnown RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 GUSBP11Q6P575 273 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 NPNTQ6UXI9 565 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 TSPAN33Q86UF1 283 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 VSIG1Q86XK7 387 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 CBARPQ8N350 705 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 ARRDC2Q8TBH0 407 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 BTN2A2Q8WVV5 523 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 TSACCQ96A04 125 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 HDAC11Q96DB2 347 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 MCCC1Q96RQ3 725 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 LGMNQ99538 433 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.09
HMGN3-202ENST00000344726 PHTF1Q9UMS5 762 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 LHX6Q9UPM6 363 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 CLCA2Q9UQC9 943 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 PPIL1Q9Y3C6 166 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 RAI2Q9Y5P3 530 aa14.46□□□□□ -0.09
HMGN3-202ENST00000344726 UNC13CQ8NB66 2214 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 A0A1W2PQ67 120 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 SOWAHDA6NJG2 315 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 LOC400499M0QZD8 3231 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 KCNK1O00180 336 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 OPA1O60313 960 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 HEXIM1O94992 359 aaKnown RBP14.45□□□□□ -0.1
HMGN3-202ENST00000344726 ALPIP09923 528 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 HOXB3P14651 431 aaPredicted RBP14.45□□□□□ -0.1
HMGN3-202ENST00000344726 TSHRP16473 764 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 CTPS1P17812 591 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 MX2P20592 715 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 FECHP22830 423 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 SLC1A1P43005 524 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 PPARDQ03181 441 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 PPIDQ08752 370 aaKnown RBP14.45□□□□□ -0.1
HMGN3-202ENST00000344726 ZBTB17Q13105 803 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 RTP5Q14D33 572 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 ACOX1Q15067 660 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 COL28A1Q2UY09 1125 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 HS1BP3Q53T59 392 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 PERM1Q5SV97 790 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 ARMC12Q5T9G4 340 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 FAXCQ5TGI0 409 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 DENND2CQ68D51 928 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 ENPP7Q6UWV6 458 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 MFSD7Q6UXD7 560 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms