RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 UGT1A9O60656 530 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 RNF40O75150 1001 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 INHBAP08476 426 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 CHRM1P11229 460 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 SRFP11831 508 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 HNF1BP35680 557 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 POLR2LP62875 67 aaKnown RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 PTPRCAPQ14761 206 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 PON2Q15165 354 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 SMAD1Q15797 465 aaKnown RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 CDKN3Q16667 212 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 TMEM196Q5HYL7 178 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 FSTL4Q6MZW2 842 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 BRAT1Q6PJG6 821 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 RASSF3Q86WH2 238 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 NDUFAF2Q8N183 169 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 ZNF513Q8N8E2 541 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 TMIEQ8NEW7 156 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 OR13C4Q8NGS5 318 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 OR8D1Q8WZ84 308 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 TLCD1Q96CP7 247 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 DNAJC1Q96KC8 554 aaKnown RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 MCCC1Q96RQ3 725 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 FAM129BQ96TA1 746 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 UGT1A7Q9HAW7 530 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 UGT1A10Q9HAW8 530 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 UGT1A8Q9HAW9 530 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 PRDM6Q9NQX0 595 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 NLE1Q9NVX2 485 aaPredicted RBP16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 OGFRQ9NZT2 677 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 SLC17A6Q9P2U8 582 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 DKK3Q9UBP4 350 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 ZNF180Q9UJW8 692 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 IKBKGQ9Y6K9 419 aa16.38■□□□□ 0.21
CEACAM1-202ENST00000344391 GOLGA8TH3BQL2 631 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 FAM155BO75949 473 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 PRNPP04156 253 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 EPHX1P07099 455 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 DRD1P21728 446 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 LPOP22079 712 aaPredicted RBP16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 OAS2P29728 719 aaKnown RBP16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 ARSDP51689 593 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 PDE1BQ01064 536 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 TMED2Q15363 201 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 ZNF805Q5CZA5 627 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 CHPFQ8IZ52 775 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 KRT222Q8N1A0 295 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 HDAC10Q969S8 669 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 TBATAQ96M53 351 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 AGAP2Q99490 1192 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 STMN4Q9H169 189 aaPredicted RBP16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 PRSS16Q9NQE7 514 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 IARS2Q9NSE4 1012 aaKnown RBP16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 SARDHQ9UL12 918 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 PPM1HQ9ULR3 514 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 NOVA2Q9UNW9 492 aaKnown RBP16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 SCN8AQ9UQD0 1980 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 A0A0U1RQS6 177 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 SLC7A4O43246 635 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 RPP40O75818 363 aaKnown RBP16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 EGFP01133 1207 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 HMGCLP35914 325 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 SEC13P55735 322 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 TMPRSS15P98073 1019 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 UGP2Q16851 508 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 CNTN4Q8IWV2 1026 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 OR4K2Q8NGD2 314 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 MAFAQ8NHW3 353 aaPredicted RBP16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 KCNV2Q8TDN2 545 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 EID2BQ96D98 161 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 MSANTD3Q96H12 275 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 CDKN2AIPNLQ96HQ2 116 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 GPR63Q9BZJ6 419 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 MFSD1Q9H3U5 465 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 IL17CQ9P0M4 197 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 GGT7Q9UJ14 662 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 PSAT1Q9Y617 370 aa16.37■□□□□ 0.21
CEACAM1-202ENST00000344391 NPIPB15A6NHN6 443 aaPredicted RBP16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 SHISA7A6NL88 538 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 C16orf96A6NNT2 1141 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 CCL22O00626 93 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 TIMP2P16035 220 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 ATP5DP30049 168 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 TIE1P35590 1138 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 GRSF1Q12849 480 aaKnown RBP eCLIP16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 THOC5Q13769 683 aaKnown RBP16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 SLC44A4Q53GD3 710 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 NEPROQ6NW34 567 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 CRTC1Q6UUV9 634 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 PACS1Q6VY07 963 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 TPRG1Q6ZUI0 275 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 USP45Q70EL2 814 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 PIP4K2CQ8TBX8 421 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 MZB1Q8WU39 189 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 CPNE1Q99829 537 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 C19orf43Q9BQ61 176 aa16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 ZFYVE1Q9HBF4 777 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms